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Software Tools and Algorithms for Biological Systems

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Cover of 'Software Tools and Algorithms for Biological Systems'

Table of Contents

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    Book Overview
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    Chapter 1 A technical platform for generating reproducible expression data from Streptomyces coelicolor batch cultivations.
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    Chapter 2 MiRNA Recognition with the yasMiR System: The Quest for Further Improvements
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    Chapter 3 Top Scoring Pair Decision Tree for Gene Expression Data Analysis
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    Chapter 4 Predictive Minimum Description Length Principle Approach to Inferring Gene Regulatory Networks
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    Chapter 5 Parsimonious Selection of Useful Genes in Microarray Gene Expression Data
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    Chapter 6 Hierarchical Signature Clustering for Time Series Microarray Data
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    Chapter 7 Microarray Database Mining and Cell Differentiation Defects in Schizophrenia
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    Chapter 8 miRNA Prediction Using Computational Approach
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    Chapter 9 Improving the Accuracy of Gene Expression Profile Classification with Lorenz Curves and Gini Ratios
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    Chapter 10 Feature Selection in Gene Expression Data Using Principal Component Analysis and Rough Set Theory
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    Chapter 11 Dramatically Reduced Precision in Microarray Analysis Retains Quantitative Properties and Provides Additional Benefits
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    Chapter 12 Algebraic Model Checking for Boolean Gene Regulatory Networks
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    Chapter 13 Comparative Advantages of Novel Algorithms Using MSR Threshold and MSR Difference Threshold for Biclustering Gene Expression Data
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    Chapter 14 Performance Comparison of SLFN Training Algorithms for DNA Microarray Classification
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    Chapter 15 Clustering Microarray Data to Determine Normalization Method
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    Chapter 16 Estimation, Modeling, and Simulation of Patterned Growth in Extreme Environments
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    Chapter 17 Performance of Univariate Forecasting on Seasonal Diseases: The Case of Tuberculosis
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    Chapter 18 Predicting Individual Affect of Health Interventions to Reduce HPV Prevalence
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    Chapter 19 Decision Tree and Ensemble Learning Algorithms with Their Applications in Bioinformatics
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    Chapter 20 Pattern Recognition of Surface EMG Biological Signals by Means of Hilbert Spectrum and Fuzzy Clustering
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    Chapter 21 Rotation of Random Forests for Genomic and Proteomic Classification Problems
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    Chapter 22 Improved Prediction of MHC Class I Binders/Non-Binders Peptides Through Artificial Neural Network Using Variable Learning Rate: SARS Corona Virus, a Case Study
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    Chapter 23 Fast Three-Dimensional Noise Reduction for Real-Time Electron Tomography
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    Chapter 24 Prediction of Chemical-Protein Binding Activity Using Contrast Graph Patterns
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    Chapter 25 Topological Constraint in High-Density Cells’ Tracking of Image Sequences
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    Chapter 26 STRIKE: A Protein–Protein Interaction Classification Approach
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    Chapter 27 Cooperativity of Protein Binding to Vesicles
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    Chapter 28 The Role of Independent Test Set in Modeling of Protein Folding Kinetics
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    Chapter 29 Branch-and-Bound Approach for Parsimonious Inference of a Species Tree from a Set of Gene Family Trees
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    Chapter 30 Sequence-Specific Sequence Comparison Using Pairwise Statistical Significance
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    Chapter 31 Modelling Short Time Series in Metabolomics: A Functional Data Analysis Approach
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    Chapter 32 Modeling of Gene Therapy for Regenerative Cells Using Intelligent Agents
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    Chapter 33 Biomarkers Discovery in Medical Genomics Data
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    Chapter 34 Computer Simulation on Disease Vector Population Replacement Driven by the Maternal Effect Dominant Embryonic Arrest
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    Chapter 35 Leukocytes Segmentation Using Markov Random Fields
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    Chapter 36 Ontology-Based Knowledge Discovery in Pharmacogenomics
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    Chapter 37 Enabling Heterogeneous Data Integration and Biomedical Event Prediction Through ICT: The Test Case of Cancer Reoccurrence
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    Chapter 38 Complexity and High-End Computing in Biology and Medicine
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    Chapter 39 Molecular Modeling Study of Interaction of Anthracenedione Class of Drug Mitoxantrone and Its Analogs with DNA Tetrameric Sequences
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    Chapter 40 A Monte Carlo Analysis of Peritoneal Antimicrobial Pharmacokinetics
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    Chapter 41 Histopathology Tissue Segmentation by Combining Fuzzy Clustering with Multiphase Vector Level Sets
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    Chapter 42 A Dynamically Masked Gaussian Can Efficiently Approximate a Distance Calculation for Image Segmentation
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    Chapter 43 Automatic and Robust System for Correcting Microarray Images’ Rotations and Isolating Spots
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    Chapter 44 Multimodality Medical Image Registration and Fusion Techniques Using Mutual Information and Genetic Algorithm-Based Approaches
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    Chapter 45 Microcalcifications Detection Using Fisher’s Linear Discriminant and Breast Density
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    Chapter 46 Enhanced Optical Flow Field of Left Ventricular Motion Using Quasi-Gaussian DCT Filter
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    Chapter 47 An Efficient Algorithm for Denoising MR and CT Images Using Digital Curvelet Transform
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    Chapter 48 On the Use of Collinear and Triangle Equation for Automatic Segmentation and Boundary Detection of Cardiac Cavity Images
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    Chapter 49 The Electromagnetic-Trait Imaging Computation of Traveling Wave Method in Breast Tumor Microwave Sensor System
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    Chapter 50 Medical Image Processing Using Novel Wavelet Filters Based on Atomic Functions: Optimal Medical Image Compression
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    Chapter 51 Cancellation of Artifacts in ECG Signals Using Block Adaptive Filtering Techniques
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    Chapter 52 Segmentation of Medical Image Sequence by Parallel Active Contour
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    Chapter 53 Computerized Decision Support System for Mass Identification in Breast Using Digital Mammogram: A Study on GA-Based Neuro-Fuzzy Approaches
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    Chapter 54 Optimization-Based Technique for Separation and Detection of Saccadic Movements and Eye-Blinking in Electrooculography Biosignals
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    Chapter 55 A Framework for Lipoprotein Ontology
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    Chapter 56 Verbal Decision Analysis Applied on the Optimization of Alzheimer’s Disease Diagnosis: A Case Study Based on Neuroimaging
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    Chapter 57 Asynchronous Brain Machine Interface-Based Control of a Wheelchair
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    Chapter 58 Toward an Application to Psychological Disorders Diagnosis
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    Chapter 59 Enhancing Medical Research Efficiency by Using Concept Maps
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    Chapter 60 Analysis of Neural Sources of P300 Event-Related Potential in Normal and Schizophrenic Participants
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    Chapter 61 Design and Development of a Tele-Healthcare Information System Based on Web Services and HL7 Standards
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    Chapter 62 Fuzzy Logic Based Expert System for the Treatment of Mobile Tooth
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    Chapter 63 A Microcomputer FES System for Wrist Moving Control
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    Chapter 64 Computer-Aided Decision System for the Clubfeet Deformities
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    Chapter 65 A Framework for Specifying Safe Behavior of the CIIP Medical System
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    Chapter 66 Lotka–Volterra System with Volterra Multiplier
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    Chapter 67 A Biological Compression Model and Its Applications
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    Chapter 68 Open Source Clinical Portals: A Model for Healthcare Information Systems to Support Care Processes and Feed Clinical Research
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    Chapter 69 Analysis and Clustering of MicroRNA Array: A New Efficient and Reliable Computational Method
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    Chapter 70 Stochastic Simulations of Mixed-Lipid Compartments: From Self-Assembling Vesicles to Self-Producing Protocells
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    Chapter 71 A New Genetic Algorithm for Polygonal Approximation
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    Chapter 72 Challenges When Using Real-World Bio-data to Calibrate Simulation Systems
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    Chapter 73 Credibility of Digital Content in a Healthcare Collaborative Community
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    Chapter 74 Using Standardized Numerical Scores for the Display and Interpretation of Biomedical Data
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    Chapter 75 ImagCell: A Computer Tool for Cell Culture Image Processing Applications in Bioimpedance Measurements
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    Chapter 76 From Ontology Selection and Semantic Web to an Integrated Information System for Food-borne Diseases and Food Safety
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    Chapter 77 Algebraic Analysis of Social Networks for Bio-surveillance: The Cases of SARS-Beijing-2003 and AH1N1 Influenza-México-2009
Attention for Chapter 14: Performance Comparison of SLFN Training Algorithms for DNA Microarray Classification
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Chapter title
Performance Comparison of SLFN Training Algorithms for DNA Microarray Classification
Chapter number 14
Book title
Software Tools and Algorithms for Biological Systems
Published by
Adv Exp Med Biol, January 2011
DOI 10.1007/978-1-4419-7046-6_14
Pubmed ID
Book ISBNs
978-1-4419-7045-9, 978-1-4419-7046-6
Authors

Huynh, Hieu Trung, Kim, Jung-Ja, Won, Yonggwan, Hieu Trung Huynh, Jung-Ja Kim, Yonggwan Won

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The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 8 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Finland 1 13%
Unknown 7 88%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 25%
Student > Bachelor 2 25%
Researcher 1 13%
Unknown 3 38%
Readers by discipline Count As %
Medicine and Dentistry 3 38%
Computer Science 1 13%
Unknown 4 50%