Title |
The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation
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Published in |
Genome Biology, April 2009
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DOI | 10.1186/gb-2009-10-4-r40 |
Pubmed ID | |
Authors |
Hideya Kawaji, Jessica Severin, Marina Lizio, Andrew Waterhouse, Shintaro Katayama, Katharine M Irvine, David A Hume, Alistair RR Forrest, Harukazu Suzuki, Piero Carninci, Yoshihide Hayashizaki, Carsten O Daub |
Abstract |
In FANTOM4, an international collaborative research project, we collected a wide range of genome-scale data, including 24 million mRNA 5'-reads (CAGE tags) and microarray expression profiles along a differentiation time course of the human THP-1 cell line and under 52 systematic siRNA perturbations. In addition, data regarding chromatin status derived from ChIP-chip to elucidate the transcriptional regulatory interactions are included. Here we present these data to the research community as an integrated web resource. |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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Germany | 3 | 3% |
United States | 2 | 2% |
Russia | 2 | 2% |
Chile | 1 | <1% |
Norway | 1 | <1% |
Switzerland | 1 | <1% |
Sweden | 1 | <1% |
Portugal | 1 | <1% |
Australia | 1 | <1% |
Other | 1 | <1% |
Unknown | 96 | 87% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Researcher | 36 | 33% |
Student > Ph. D. Student | 31 | 28% |
Professor | 9 | 8% |
Professor > Associate Professor | 9 | 8% |
Student > Master | 5 | 5% |
Other | 8 | 7% |
Unknown | 12 | 11% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 62 | 56% |
Biochemistry, Genetics and Molecular Biology | 10 | 9% |
Medicine and Dentistry | 7 | 6% |
Computer Science | 4 | 4% |
Neuroscience | 3 | 3% |
Other | 8 | 7% |
Unknown | 16 | 15% |