| Title |
OmniSpect: An Open MATLAB-Based Tool for Visualization and Analysis of Matrix-Assisted Laser Desorption/Ionization and Desorption Electrospray Ionization Mass Spectrometry Images
|
|---|---|
| Published in |
Journal of the American Society for Mass Spectrometry, February 2013
|
| DOI | 10.1007/s13361-012-0572-y |
| Pubmed ID | |
| Authors |
R. Mitchell Parry, Asiri S. Galhena, Chaminda M. Gamage, Rachel V. Bennett, May D. Wang, Facundo M. Fernández |
| Abstract |
We present omniSpect, an open source web- and MATLAB-based software tool for both desorption electrospray ionization (DESI) and matrix-assisted laser desorption ionization (MALDI) mass spectrometry imaging (MSI) that performs computationally intensive functions on a remote server. These functions include converting data from a variety of file formats into a common format easily manipulated in MATLAB, transforming time-series mass spectra into mass spectrometry images based on a probe spatial raster path, and multivariate analysis. OmniSpect provides an extensible suite of tools to meet the computational requirements needed for visualizing open and proprietary format MSI data. |
Mendeley readers
The data shown below were compiled from readership statistics for 61 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| United States | 2 | 3% |
| Canada | 1 | 2% |
| Unknown | 58 | 95% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Researcher | 17 | 28% |
| Student > Ph. D. Student | 14 | 23% |
| Student > Bachelor | 7 | 11% |
| Student > Master | 5 | 8% |
| Other | 4 | 7% |
| Other | 9 | 15% |
| Unknown | 5 | 8% |
| Readers by discipline | Count | As % |
|---|---|---|
| Chemistry | 15 | 25% |
| Computer Science | 9 | 15% |
| Biochemistry, Genetics and Molecular Biology | 8 | 13% |
| Agricultural and Biological Sciences | 8 | 13% |
| Engineering | 6 | 10% |
| Other | 7 | 11% |
| Unknown | 8 | 13% |
Attention Score in Context
This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 24 April 2013.
All research outputs
#20,656,161
of 25,373,627 outputs
Outputs from Journal of the American Society for Mass Spectrometry
#3,083
of 3,833 outputs
Outputs of similar age
#158,054
of 205,032 outputs
Outputs of similar age from Journal of the American Society for Mass Spectrometry
#18
of 20 outputs
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So far Altmetric has tracked 3,833 research outputs from this source. They receive a mean Attention Score of 3.8. This one is in the 10th percentile – i.e., 10% of its peers scored the same or lower than it.
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