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Distributions of positive signals in pyrosequencing

Overview of attention for article published in Journal of Mathematical Biology, May 2013
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Title
Distributions of positive signals in pyrosequencing
Published in
Journal of Mathematical Biology, May 2013
DOI 10.1007/s00285-013-0691-5
Pubmed ID
Authors

Yong Kong

Abstract

Pyrosequencing is one of the important next-generation sequencing technologies. We derive the distribution of the number of positive signals in pyrograms of this sequencing technology as a function of flow cycle numbers and nucleotide probabilities of the target sequences. As for the distribution of sequence length, we also derive the distribution of positive signals for the fixed flow cycle model. Explicit formulas are derived for the mean and variance of the distributions. A simple result for the mean of the distribution is that the mean number of positive signals in a pyrogram is approximately twice the number of flow cycles, regardless of nucleotide probabilities. The statistical distributions will be useful for instrument and software development for pyrosequencing and other related platforms.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 5 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 20%
Sweden 1 20%
Unknown 3 60%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 40%
Student > Ph. D. Student 1 20%
Professor > Associate Professor 1 20%
Lecturer 1 20%
Readers by discipline Count As %
Agricultural and Biological Sciences 4 80%
Mathematics 1 20%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 November 2014.
All research outputs
#13,890,926
of 22,711,645 outputs
Outputs from Journal of Mathematical Biology
#271
of 655 outputs
Outputs of similar age
#106,292
of 194,697 outputs
Outputs of similar age from Journal of Mathematical Biology
#3
of 13 outputs
Altmetric has tracked 22,711,645 research outputs across all sources so far. This one is in the 37th percentile – i.e., 37% of other outputs scored the same or lower than it.
So far Altmetric has tracked 655 research outputs from this source. They receive a mean Attention Score of 3.6. This one has gotten more attention than average, scoring higher than 57% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 194,697 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 44th percentile – i.e., 44% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 13 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 76% of its contemporaries.