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A targeted metabolomic protocol for short-chain fatty acids and branched-chain amino acids

Overview of attention for article published in Metabolomics, February 2013
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Title
A targeted metabolomic protocol for short-chain fatty acids and branched-chain amino acids
Published in
Metabolomics, February 2013
DOI 10.1007/s11306-013-0500-6
Pubmed ID
Authors

Xiaojiao Zheng, Yunping Qiu, Wei Zhong, Sarah Baxter, Mingming Su, Qiong Li, Guoxiang Xie, Brandon M. Ore, Shanlei Qiao, Melanie D. Spencer, Steven H. Zeisel, Zhanxiang Zhou, Aihua Zhao, Wei Jia

Abstract

Research in obesity and metabolic disorders that involve intestinal microbiota demands reliable methods for the precise measurement of the short-chain fatty acids (SCFAs) and branched-chain amino acids (BCAAs) concentration. Here, we report a rapid method of simultaneously determining SCFAs and BCAAs in biological samples using propyl chloroformate (PCF) derivatization followed by gas chromatography mass spectrometry (GC-MS) analysis. A one-step derivatization using 100 µL of PCF in a reaction system of water, propanol, and pyridine (v/v/v = 8:3:2) at pH 8 provided the optimal derivatization efficiency. The best extraction efficiency of the derivatized products was achieved by a two-step extraction with hexane. The method exhibited good derivatization efficiency and recovery for a wide range of concentrations with a low limit of detection for each compound. The relative standard deviations (RSDs) of all targeted compounds showed good intra- and inter-day (within 7 days) precision (< 10%), and good stability (< 20%) within 4 days at room temperature (23-25 °C), or 7 days when stored at -20 °C. We applied our method to measure SCFA and BCAA levels in fecal samples from rats administrated with different diet. Both univariate and multivariate statistics analysis of the concentrations of these target metabolites could differentiate three groups with ethanol intervention and different oils in diet. This method was also successfully employed to determine SCFA and BCAA in the feces, plasma and urine from normal humans, providing important baseline information of the concentrations of these metabolites. This novel metabolic profile study has great potential for translational research.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 298 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Spain 3 1%
Malaysia 2 <1%
France 1 <1%
Austria 1 <1%
Vietnam 1 <1%
Canada 1 <1%
Sweden 1 <1%
Unknown 288 97%

Demographic breakdown

Readers by professional status Count As %
Researcher 53 18%
Student > Ph. D. Student 52 17%
Student > Master 34 11%
Student > Bachelor 30 10%
Student > Doctoral Student 13 4%
Other 41 14%
Unknown 75 25%
Readers by discipline Count As %
Agricultural and Biological Sciences 49 16%
Chemistry 46 15%
Biochemistry, Genetics and Molecular Biology 38 13%
Medicine and Dentistry 31 10%
Immunology and Microbiology 15 5%
Other 31 10%
Unknown 88 30%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 04 September 2013.
All research outputs
#18,345,822
of 22,719,618 outputs
Outputs from Metabolomics
#1,071
of 1,291 outputs
Outputs of similar age
#219,614
of 283,201 outputs
Outputs of similar age from Metabolomics
#12
of 12 outputs
Altmetric has tracked 22,719,618 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,291 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one is in the 4th percentile – i.e., 4% of its peers scored the same or lower than it.
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We're also able to compare this research output to 12 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.