| Title |
The pepper virome: natural co-infection of diverse viruses and their quasispecies
|
|---|---|
| Published in |
BMC Genomics, June 2017
|
| DOI | 10.1186/s12864-017-3838-8 |
| Pubmed ID | |
| Authors |
Yeonhwa Jo, Hoseong Choi, Sang-Min Kim, Sun-Lim Kim, Bong Choon Lee, Won Kyong Cho |
| Abstract |
The co-infection of diverse viruses in a host plant is common; however, little is known about viral populations and their quasispecies in the host. Here, we report the first pepper viromes that were co-infected by different types of viral genomes. The pepper viromes are dominated by geminivirus DNA-A followed by a novel carlavirus referred to as Pepper virus A. The two pepper cultivars share similar viral populations and replications. However, the quasispecies for double-stranded RNA virus and two satellite DNAs were heterogeneous and homogenous in susceptible and resistant cultivars, respectively, indicating the quasispecies of an individual virus depends on the host. Taken together, we provide the first evidence that the host plant resistant to viruses has an unrevealed antiviral system, affecting viral quasispecies, not replication. |
X Demographics
The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Unknown | 1 | 100% |
Demographic breakdown
| Type | Count | As % |
|---|---|---|
| Scientists | 1 | 100% |
Mendeley readers
The data shown below were compiled from readership statistics for 97 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Netherlands | 1 | 1% |
| Unknown | 96 | 99% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Student > Ph. D. Student | 16 | 16% |
| Researcher | 16 | 16% |
| Student > Master | 13 | 13% |
| Student > Doctoral Student | 12 | 12% |
| Professor > Associate Professor | 6 | 6% |
| Other | 13 | 13% |
| Unknown | 21 | 22% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 43 | 44% |
| Biochemistry, Genetics and Molecular Biology | 20 | 21% |
| Immunology and Microbiology | 3 | 3% |
| Nursing and Health Professions | 1 | 1% |
| Environmental Science | 1 | 1% |
| Other | 3 | 3% |
| Unknown | 26 | 27% |
Attention Score in Context
This research output has an Altmetric Attention Score of 8. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 June 2017.
All research outputs
#4,110,594
of 22,979,862 outputs
Outputs from BMC Genomics
#1,698
of 10,687 outputs
Outputs of similar age
#73,347
of 317,335 outputs
Outputs of similar age from BMC Genomics
#49
of 218 outputs
Altmetric has tracked 22,979,862 research outputs across all sources so far. Compared to these this one has done well and is in the 82nd percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 10,687 research outputs from this source. They receive a mean Attention Score of 4.7. This one has done well, scoring higher than 84% of its peers.
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We're also able to compare this research output to 218 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 77% of its contemporaries.