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Guidelines for investigating causality of sequence variants in human disease

Overview of attention for article published in Nature, April 2014
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  • In the top 5% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (99th percentile)
  • High Attention Score compared to outputs of the same age and source (89th percentile)

Citations

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1109 Dimensions

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1999 Mendeley
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30 CiteULike
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Title
Guidelines for investigating causality of sequence variants in human disease
Published in
Nature, April 2014
DOI 10.1038/nature13127
Pubmed ID
Authors

D. G. MacArthur, T. A. Manolio, D. P. Dimmock, H. L. Rehm, J. Shendure, G. R. Abecasis, D. R. Adams, R. B. Altman, S. E. Antonarakis, E. A. Ashley, J. C. Barrett, L. G. Biesecker, D. F. Conrad, G. M. Cooper, N. J. Cox, M. J. Daly, M. B. Gerstein, D. B. Goldstein, J. N. Hirschhorn, S. M. Leal, L. A. Pennacchio, J. A. Stamatoyannopoulos, S. R. Sunyaev, D. Valle, B. F. Voight, W. Winckler, C. Gunter

Abstract

The discovery of rare genetic variants is accelerating, and clear guidelines for distinguishing disease-causing sequence variants from the many potentially functional variants present in any human genome are urgently needed. Without rigorous standards we risk an acceleration of false-positive reports of causality, which would impede the translation of genomic research findings into the clinical diagnostic setting and hinder biological understanding of disease. Here we discuss the key challenges of assessing sequence variants in human disease, integrating both gene-level and variant-level support for causality. We propose guidelines for summarizing confidence in variant pathogenicity and highlight several areas that require further resource development.

X Demographics

X Demographics

The data shown below were collected from the profiles of 282 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 1,999 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 42 2%
United Kingdom 21 1%
Germany 10 <1%
Spain 9 <1%
Brazil 7 <1%
France 6 <1%
Italy 6 <1%
South Africa 5 <1%
Australia 5 <1%
Other 44 2%
Unknown 1844 92%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 476 24%
Researcher 475 24%
Student > Master 183 9%
Student > Bachelor 141 7%
Other 124 6%
Other 419 21%
Unknown 181 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 664 33%
Biochemistry, Genetics and Molecular Biology 486 24%
Medicine and Dentistry 348 17%
Computer Science 75 4%
Neuroscience 60 3%
Other 138 7%
Unknown 228 11%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 258. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 24 May 2023.
All research outputs
#145,710
of 25,866,425 outputs
Outputs from Nature
#9,284
of 98,941 outputs
Outputs of similar age
#1,117
of 242,819 outputs
Outputs of similar age from Nature
#107
of 1,006 outputs
Altmetric has tracked 25,866,425 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 99th percentile: it's in the top 5% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 98,941 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 102.8. This one has done particularly well, scoring higher than 90% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 242,819 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 99% of its contemporaries.
We're also able to compare this research output to 1,006 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 89% of its contemporaries.