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GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs

Overview of attention for article published in BMC Bioinformatics, April 2010
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Mentioned by

peer_reviews
1 peer review site

Citations

dimensions_citation
73 Dimensions

Readers on

mendeley
90 Mendeley
citeulike
3 CiteULike
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Title
GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs
Published in
BMC Bioinformatics, April 2010
DOI 10.1186/1471-2105-11-221
Pubmed ID
Authors

Alberto Risueño, Celia Fontanillo, Marcel E Dinger, Javier De Las Rivas

Abstract

Genome-wide expression studies have developed exponentially in recent years as a result of extensive use of microarray technology. However, expression signals are typically calculated using the assignment of "probesets" to genes, without addressing the problem of "gene" definition or proper consideration of the location of the measuring probes in the context of the currently known genomes and transcriptomes. Moreover, as our knowledge of metazoan genomes improves, the number of both protein-coding and noncoding genes, as well as their associated isoforms, continues to increase. Consequently, there is a need for new databases that combine genomic and transcriptomic information and provide updated mapping of expression probes to current genomic annotations.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 90 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United Kingdom 2 2%
Italy 1 1%
Ukraine 1 1%
Canada 1 1%
Denmark 1 1%
Russia 1 1%
Japan 1 1%
United States 1 1%
Unknown 81 90%

Demographic breakdown

Readers by professional status Count As %
Researcher 25 28%
Student > Ph. D. Student 23 26%
Professor > Associate Professor 9 10%
Professor 6 7%
Student > Bachelor 6 7%
Other 13 14%
Unknown 8 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 39 43%
Biochemistry, Genetics and Molecular Biology 12 13%
Medicine and Dentistry 9 10%
Computer Science 8 9%
Engineering 4 4%
Other 9 10%
Unknown 9 10%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 April 2014.
All research outputs
#15,299,919
of 22,754,104 outputs
Outputs from BMC Bioinformatics
#5,370
of 7,269 outputs
Outputs of similar age
#77,685
of 95,435 outputs
Outputs of similar age from BMC Bioinformatics
#54
of 69 outputs
Altmetric has tracked 22,754,104 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,269 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one is in the 18th percentile – i.e., 18% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 95,435 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 10th percentile – i.e., 10% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 69 others from the same source and published within six weeks on either side of this one. This one is in the 14th percentile – i.e., 14% of its contemporaries scored the same or lower than it.