↓ Skip to main content

mRNA Processing

Overview of attention for book
Cover of 'mRNA Processing'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Detection and Identification of Uncapped RNA by Ligation-Mediated Reverse Transcription Polymerase Chain Reaction
  3. Altmetric Badge
    Chapter 2 Preparation of Splicing Competent Nuclear Extract from Mammalian Cells and In Vitro Pre-mRNA Splicing Assay
  4. Altmetric Badge
    Chapter 3 Single-Molecule Analysis of Pre-mRNA Splicing with Colocalization Single-Molecule Spectroscopy (CoSMoS)
  5. Altmetric Badge
    Chapter 4 In Vitro Modulation of Endogenous Alternative Splicing Using Splice-Switching Antisense Oligonucleotides
  6. Altmetric Badge
    Chapter 5 Purification of mRNA Processing Complexes Using an RNA Affinity Approach
  7. Altmetric Badge
    Chapter 6 Polyadenylation Site-Based Analysis of Transcript Expression by 3′READS+
  8. Altmetric Badge
    Chapter 7 Comprehensive Identification of mRNA Polyadenylation Sites by PAPERCLIP
  9. Altmetric Badge
    Chapter 8 Microinjection and Fluorescence In Situ Hybridization Assay for Studying mRNA Export in Mammalian Cells
  10. Altmetric Badge
    Chapter 9 Methods for the Detection of Adenosine-to-Inosine Editing Events in Cellular RNA
  11. Altmetric Badge
    Chapter 10 Using RNA-Seq to Discover Genetic Polymorphisms That Produce Hidden Splice Variants
  12. Altmetric Badge
    Chapter 11 Inducible Expression of Eukaryotic Circular RNAs from Plasmids
  13. Altmetric Badge
    Chapter 12 Methods for Extraction of RNA, Proteins, or Protein Complexes from Subcellular Compartments of Eukaryotic Cells
  14. Altmetric Badge
    Chapter 13 Isolation of Newly Transcribed RNA Using the Metabolic Label 4-Thiouridine
  15. Altmetric Badge
    Chapter 14 Robust, Cost-Effective Profiling of RNA Binding Protein Targets with Single-end Enhanced Crosslinking and Immunoprecipitation (seCLIP)
  16. Altmetric Badge
    Chapter 15 Purification of Transcript-Specific mRNP Complexes Formed In Vivo from Saccharomyces cerevisiae
  17. Altmetric Badge
    Chapter 16 A Cell-Based High-Throughput Method for Identifying Modulators of Alternative Splicing
  18. Altmetric Badge
    Chapter 17 Genome-Wide RNAi Screens for RNA Processing Events in Drosophila melanogaster S2 Cells
  19. Altmetric Badge
    Chapter 18 Assaying RNA Structure Inside Living Cells with SHAPE
  20. Altmetric Badge
    Chapter 19 Erratum to: Robust, Cost-Effective Profiling of RNA Binding Protein Targets with Single-end Enhanced Crosslinking and Immunoprecipitation (seCLIP)
Attention for Chapter 18: Assaying RNA Structure Inside Living Cells with SHAPE
Altmetric Badge

About this Attention Score

  • Average Attention Score compared to outputs of the same age
  • Above-average Attention Score compared to outputs of the same age and source (61st percentile)

Mentioned by

twitter
3 X users

Citations

dimensions_citation
1 Dimensions

Readers on

mendeley
6 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
Assaying RNA Structure Inside Living Cells with SHAPE
Chapter number 18
Book title
mRNA Processing
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-7204-3_18
Pubmed ID
Book ISBNs
978-1-4939-7203-6, 978-1-4939-7204-3
Authors

Chao Feng, Dalen Chan, Robert C. Spitale

Abstract

RNA molecules have emerged as key players in nearly every facet of gene regulation. Such functions are governed by RNA's unique ability to fold into intricate secondary and tertiary structures. In order to understand, on the molecular level, how such structures from several chemical and enzymatic methods have been developed. One such method is RNA Selective Hydroxyl Acylation analyzed by Primer Extension, or SHAPE. SHAPE has emerged as a premier method of measuring RNA structure, with recent developments extending SHAPE into living cells. Here, we describe the use of SHAPE for measuring RNA structure inside living cells.

X Demographics

X Demographics

The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 2 33%
Student > Doctoral Student 2 33%
Student > Ph. D. Student 1 17%
Other 1 17%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 3 50%
Computer Science 1 17%
Agricultural and Biological Sciences 1 17%
Chemistry 1 17%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 August 2017.
All research outputs
#14,360,215
of 22,996,001 outputs
Outputs from Methods in molecular biology
#4,219
of 13,151 outputs
Outputs of similar age
#230,319
of 421,191 outputs
Outputs of similar age from Methods in molecular biology
#367
of 1,074 outputs
Altmetric has tracked 22,996,001 research outputs across all sources so far. This one is in the 35th percentile – i.e., 35% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,151 research outputs from this source. They receive a mean Attention Score of 3.4. This one has gotten more attention than average, scoring higher than 64% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 421,191 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 42nd percentile – i.e., 42% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 1,074 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 61% of its contemporaries.