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Root defense analysis against Fusarium oxysporum reveals new regulators to confer resistance

Overview of attention for article published in Scientific Reports, July 2014
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  • Good Attention Score compared to outputs of the same age (67th percentile)
  • Above-average Attention Score compared to outputs of the same age and source (63rd percentile)

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Title
Root defense analysis against Fusarium oxysporum reveals new regulators to confer resistance
Published in
Scientific Reports, July 2014
DOI 10.1038/srep05584
Pubmed ID
Authors

Yi Chung Chen, Chin Lin Wong, Frederico Muzzi, Ido Vlaardingerbroek, Brendan N. Kidd, Peer M. Schenk

Abstract

Fusarium oxysporum is a root-infecting fungal pathogen that causes wilt disease on a broad range of plant species, including Arabidopsis thaliana. Investigation of the defense response against this pathogen had primarily been conducted using leaf tissue and little was known about the root defense response. In this study, we profiled the expression of root genes after infection with F. oxysporum by microarray analysis. In contrast to the leaf response, root tissue did not show a strong induction of defense-associated gene expression and instead showed a greater proportion of repressed genes. Screening insertion mutants from differentially expressed genes in the microarray uncovered a role for the transcription factor ETHYLENE RESPONSE FACTOR72 (ERF72) in susceptibility to F. oxysporum. Due to the role of ERF72 in suppressing programmed cell death and detoxifying reactive oxygen species (ROS), we examined the pub22/pub23/pub24 U-box type E3 ubiquitin ligase triple mutant which is known to possess enhanced ROS production in response to pathogen challenge. We found that the pub22/23/24 mutant is more resistant to F. oxysporum infection, suggesting that a heightened innate immune response provides protection against F. oxysporum. We conclude that root-mediated defenses against soil-borne pathogens can be provided at multiple levels.

X Demographics

X Demographics

The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 163 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Colombia 2 1%
Netherlands 1 <1%
Australia 1 <1%
Brazil 1 <1%
Romania 1 <1%
Japan 1 <1%
Unknown 156 96%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 39 24%
Researcher 34 21%
Student > Master 26 16%
Student > Bachelor 12 7%
Student > Doctoral Student 10 6%
Other 14 9%
Unknown 28 17%
Readers by discipline Count As %
Agricultural and Biological Sciences 90 55%
Biochemistry, Genetics and Molecular Biology 24 15%
Chemistry 5 3%
Engineering 3 2%
Pharmacology, Toxicology and Pharmaceutical Science 2 1%
Other 5 3%
Unknown 34 21%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 08 December 2015.
All research outputs
#7,387,786
of 22,758,248 outputs
Outputs from Scientific Reports
#50,097
of 122,769 outputs
Outputs of similar age
#72,407
of 225,738 outputs
Outputs of similar age from Scientific Reports
#307
of 854 outputs
Altmetric has tracked 22,758,248 research outputs across all sources so far. This one has received more attention than most of these and is in the 67th percentile.
So far Altmetric has tracked 122,769 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 18.2. This one has gotten more attention than average, scoring higher than 58% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 225,738 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 67% of its contemporaries.
We're also able to compare this research output to 854 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 63% of its contemporaries.