DNA Computing

Table of Contents

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   Book Overview
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   Chapter 1 An Object Oriented Simulation of Real Occurring Molecular Biological Processes for DNA Computing and Its Experimental Verification
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   Chapter 2 Towards Optimization of PCR Protocol in DNA Computing
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   Chapter 3 DNASequenceGenerator: A Program for the Construction of DNA Sequences
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   Chapter 4 DNA Computing in Microreactors
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   Chapter 5 Cascadable Hybridisation Transfer of Specific DNA between Microreactor Selection Modules
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   Chapter 6 Coding Properties of DNA Languages
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   Chapter 7 Boundary Components of Thickened Graphs
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   Chapter 8 Population Computation and Majority Inference in Test Tube
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    Chapter 9 DNA Starts to Learn Poker
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    Chapter 10 PNA-mediated Whiplash PCR
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    Chapter 11 Biomolecular Computation in Virtual Test Tubes
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    Chapter 12 Developing Support System for Sequence Design in DNA Computing
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    Chapter 13 The Fidelity of the Tag-Antitag System
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    Chapter 14 PUNCH: An Evolutionary Algorithm for Optimizing Bit Set Selection
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    Chapter 15 Solving Knapsack Problems in a Sticker Based Model
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    Chapter 16 A Clause String DNA Algorithm for SAT
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    Chapter 17 A Proposal of DNA Computing on Beads with Application to SAT Problems
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    Chapter 18 Aqueous Solutions of Algorithmic Problems: Emphasizing Knights on a 3 × 3
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    Chapter 19 Solutions of Shortest Path Problems by Concentration Control
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    Chapter 20 Another Realization of Aqueous Computing with Peptide Nucleic Acid
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    Chapter 21 Experimental Confirmation of the Basic Principles of Length-only Discrimination
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    Chapter 22 Experimental Construction of Very Large Scale DNA Databases with Associative Search Capability
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    Chapter 23 Operation of a Purified DNA Nanoactuator
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    Chapter 24 DNA Scissors
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    Chapter 25 A Realization of Information Gate by Using Enterococcus faecalis Pheromone System
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    Chapter 26 Patterns of Micronuclear Genes in Ciliates
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    Chapter 27 Peptide Computing - Universality and Complexity
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    Chapter 28 Programmed Mutagenesis Is a Universal Model of Computation
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    Chapter 29 Horn Clause Computation by Self-assembly of DNA Molecules
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    Chapter 30 DNA-based Parallel Computation of Simple Arithmetic
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    Chapter 31 On P Systems with Global Rules
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    Chapter 32 Computing with Membranes: Variants with an Enhanced Membrane Handling
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    Chapter 33 Towards an Electronic Implementation of Membrane Computing: A Formal Description of Non-deterministic Evolution in Transition P Systems
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    Chapter 34 Insertion-Deletion P Systems
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    Chapter 35 A Universal Time-Varying Distributed H System of Degree 1
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    Chapter 36 A Note on Graph Splicing Languages