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An algebraic view of bacterial genome evolution

Overview of attention for article published in Journal of Mathematical Biology, December 2013
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Title
An algebraic view of bacterial genome evolution
Published in
Journal of Mathematical Biology, December 2013
DOI 10.1007/s00285-013-0747-6
Pubmed ID
Authors

Andrew R. Francis

Abstract

Rearrangements of bacterial chromosomes can be studied mathematically at several levels, most prominently at a local, or sequence level, as well as at a topological level. The biological changes involved locally are inversions, deletions, and transpositions, while topologically they are knotting and catenation. These two modelling approaches share some surprising algebraic features related to braid groups and Coxeter groups. The structural approach that is at the core of algebra has long found applications in sciences such as physics and analytical chemistry, but only in a small number of ways so far in biology. And yet there are examples where an algebraic viewpoint may capture a deeper structure behind biological phenomena. This article discusses a family of biological problems in bacterial genome evolution for which this may be the case, and raises the prospect that the tools developed by algebraists over the last century might provide insight to this area of evolutionary biology.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 25 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 8%
United Kingdom 1 4%
Germany 1 4%
Unknown 21 84%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 10 40%
Student > Master 4 16%
Professor > Associate Professor 3 12%
Researcher 3 12%
Student > Bachelor 1 4%
Other 1 4%
Unknown 3 12%
Readers by discipline Count As %
Agricultural and Biological Sciences 9 36%
Mathematics 4 16%
Biochemistry, Genetics and Molecular Biology 3 12%
Computer Science 3 12%
Physics and Astronomy 1 4%
Other 1 4%
Unknown 4 16%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 10 November 2014.
All research outputs
#19,017,658
of 23,577,761 outputs
Outputs from Journal of Mathematical Biology
#465
of 678 outputs
Outputs of similar age
#234,131
of 309,712 outputs
Outputs of similar age from Journal of Mathematical Biology
#3
of 12 outputs
Altmetric has tracked 23,577,761 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 678 research outputs from this source. They receive a mean Attention Score of 3.7. This one is in the 16th percentile – i.e., 16% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 309,712 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 12th percentile – i.e., 12% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 12 others from the same source and published within six weeks on either side of this one. This one is in the 33rd percentile – i.e., 33% of its contemporaries scored the same or lower than it.