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The UCSC Genome Browser database: 2015 update

Overview of attention for article published in Nucleic Acids Research, November 2014
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (94th percentile)
  • High Attention Score compared to outputs of the same age and source (94th percentile)

Mentioned by

blogs
2 blogs
twitter
12 X users
facebook
2 Facebook pages
wikipedia
2 Wikipedia pages
googleplus
1 Google+ user

Citations

dimensions_citation
852 Dimensions

Readers on

mendeley
568 Mendeley
citeulike
2 CiteULike
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Title
The UCSC Genome Browser database: 2015 update
Published in
Nucleic Acids Research, November 2014
DOI 10.1093/nar/gku1177
Pubmed ID
Authors

Kate R. Rosenbloom, Joel Armstrong, Galt P. Barber, Jonathan Casper, Hiram Clawson, Mark Diekhans, Timothy R. Dreszer, Pauline A. Fujita, Luvina Guruvadoo, Maximilian Haeussler, Rachel A. Harte, Steve Heitner, Glenn Hickey, Angie S. Hinrichs, Robert Hubley, Donna Karolchik, Katrina Learned, Brian T. Lee, Chin H. Li, Karen H. Miga, Ngan Nguyen, Benedict Paten, Brian J. Raney, Arian F. A. Smit, Matthew L. Speir, Ann S. Zweig, David Haussler, Robert M. Kuhn, W. James Kent

Abstract

Launched in 2001 to showcase the draft human genome assembly, the UCSC Genome Browser database (http://genome.ucsc.edu) and associated tools continue to grow, providing a comprehensive resource of genome assemblies and annotations to scientists and students worldwide. Highlights of the past year include the release of a browser for the first new human genome reference assembly in 4 years in December 2013 (GRCh38, UCSC hg38), a watershed comparative genomics annotation (100-species multiple alignment and conservation) and a novel distribution mechanism for the browser (GBiB: Genome Browser in a Box). We created browsers for new species (Chinese hamster, elephant shark, minke whale), 'mined the web' for DNA sequences and expanded the browser display with stacked color graphs and region highlighting. As our user community increasingly adopts the UCSC track hub and assembly hub representations for sharing large-scale genomic annotation data sets and genome sequencing projects, our menu of public data hubs has tripled.

X Demographics

X Demographics

The data shown below were collected from the profiles of 12 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 568 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 7 1%
United Kingdom 4 <1%
Germany 3 <1%
Netherlands 2 <1%
Spain 2 <1%
Russia 2 <1%
Italy 2 <1%
Norway 1 <1%
Uruguay 1 <1%
Other 12 2%
Unknown 532 94%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 148 26%
Researcher 109 19%
Student > Master 71 13%
Student > Bachelor 56 10%
Other 27 5%
Other 99 17%
Unknown 58 10%
Readers by discipline Count As %
Agricultural and Biological Sciences 194 34%
Biochemistry, Genetics and Molecular Biology 153 27%
Medicine and Dentistry 46 8%
Computer Science 40 7%
Neuroscience 9 2%
Other 47 8%
Unknown 79 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 26. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 20 January 2024.
All research outputs
#1,513,080
of 25,837,817 outputs
Outputs from Nucleic Acids Research
#1,101
of 27,769 outputs
Outputs of similar age
#19,734
of 373,388 outputs
Outputs of similar age from Nucleic Acids Research
#22
of 395 outputs
Altmetric has tracked 25,837,817 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 93rd percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 27,769 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 7.2. This one has done particularly well, scoring higher than 95% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 373,388 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 94% of its contemporaries.
We're also able to compare this research output to 395 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 94% of its contemporaries.