Title |
Complete genome sequence of a new strain of Lagenaria siceraria endornavirus from China
|
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Published in |
Archives of Virology, December 2017
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DOI | 10.1007/s00705-017-3664-y |
Pubmed ID | |
Authors |
Xiaoqin Peng, Hui Pan, Arif Muhammad, Hongliu An, Shouguo Fang, Weimin Li, Songbai Zhang |
Abstract |
An RNA virus tentatively named Lagenaria siceraria endornavirus-Hubei (LsEV-HuB) was isolated from Lagenaria siceraria var. hispida in Hubei, China. The LsEV-HuB genome consists of 15,098 bp and contains a single open reading frame (ORF) encoding a large protein with several conserved domains, including one helicase domain, one glycosyltransferase domain, two capsular polysaccharide synthesis protein (CPS) domains, and one RNA-dependent RNA polymerase (RdRp) domain. LsEV-HuB has nucleotide and amino acid sequence identities of 72.96% and 77.95%, respectively, to Lagenaria siceraria endornavirus-California (LsEV-CA), the closest relative of LsEV-HuB. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 1 | 100% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Members of the public | 1 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 14 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Other | 2 | 14% |
Researcher | 2 | 14% |
Student > Doctoral Student | 1 | 7% |
Librarian | 1 | 7% |
Student > Bachelor | 1 | 7% |
Other | 1 | 7% |
Unknown | 6 | 43% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 4 | 29% |
Biochemistry, Genetics and Molecular Biology | 3 | 21% |
Medicine and Dentistry | 1 | 7% |
Engineering | 1 | 7% |
Unknown | 5 | 36% |