Title |
Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
|
---|---|
Published in |
Data in Brief, January 2015
|
DOI | 10.1016/j.gdata.2015.01.003 |
Pubmed ID | |
Authors |
Rajesh Patel, Vishal Mevada, Dhaval Prajapati, Pravin Dudhagara, Prakash Koringa, C.G. Joshi |
Abstract |
We report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612. Community metagenomics revealed total 1802 species belonged to 43 different phyla with dominating Marinobacter (48.7%) and Halobacterium (4.6%) genus in bacterial and archaeal domain respectively. Remarkably, 18.2% sequences in a poorly characterized group and 4% gene for various stress responses along with versatile presence of commercial enzyme were evident in a functional metagenome analysis. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
United Kingdom | 2 | 33% |
United States | 1 | 17% |
Cameroon | 1 | 17% |
Unknown | 2 | 33% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Scientists | 3 | 50% |
Members of the public | 2 | 33% |
Practitioners (doctors, other healthcare professionals) | 1 | 17% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
Brazil | 3 | 3% |
India | 1 | 1% |
United States | 1 | 1% |
Unknown | 91 | 95% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Ph. D. Student | 19 | 20% |
Researcher | 18 | 19% |
Student > Master | 13 | 14% |
Student > Bachelor | 8 | 8% |
Professor | 5 | 5% |
Other | 15 | 16% |
Unknown | 18 | 19% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 30 | 31% |
Biochemistry, Genetics and Molecular Biology | 17 | 18% |
Immunology and Microbiology | 10 | 10% |
Environmental Science | 3 | 3% |
Earth and Planetary Sciences | 3 | 3% |
Other | 7 | 7% |
Unknown | 26 | 27% |