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Association mapping of resistance to Puccinia hordei in Australian barley breeding germplasm

Overview of attention for article published in Theoretical and Applied Genetics, March 2014
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Title
Association mapping of resistance to Puccinia hordei in Australian barley breeding germplasm
Published in
Theoretical and Applied Genetics, March 2014
DOI 10.1007/s00122-014-2291-1
Pubmed ID
Authors

L. A. Ziems, L. T. Hickey, C. H. Hunt, E. S. Mace, G. J. Platz, J. D. Franckowiak, D. R. Jordan

Abstract

"To find stable resistance using association mapping tools, QTL with major and minor effects on leaf rust reactions were identified in barley breeding lines by assessing seedlings and adult plants." Three hundred and sixty (360) elite barley (Hordeum vulgare L.) breeding lines from the Northern Region Barley Breeding Program in Australia were genotyped with 3,244 polymorphic diversity arrays technology markers and the results used to map quantitative trait loci (QTL) conferring a reaction to leaf rust (Puccinia hordei Otth). The F3:5 (Stage 2) lines were derived or sourced from different geographic origins or hubs of international barley breeding ventures representing two breeding cycles (2009 and 2011 trials) and were evaluated across eight environments for infection type at both seedling and adult plant stages. Association mapping was performed using mean scores for disease reaction, accounting for family effects using the eigenvalues from a matrix of genotype correlations. In this study, 15 QTL were detected; 5 QTL co-located with catalogued leaf rust resistance genes (Rph1, Rph3/19, Rph8/14/15, Rph20, Rph21), 6 QTL aligned with previously reported genomic regions and 4 QTL (3 on chromosome 1H and 1 on 7H) were novel. The adult plant resistance gene Rph20 was identified across the majority of environments and pathotypes. The QTL detected in this study offer opportunities for breeding for more durable resistance to leaf rust through pyramiding multiple genomic regions via marker-assisted selection.

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Geographical breakdown

Country Count As %
Uruguay 1 5%
Unknown 20 95%

Demographic breakdown

Readers by professional status Count As %
Student > Master 6 29%
Student > Doctoral Student 4 19%
Researcher 4 19%
Student > Ph. D. Student 2 10%
Professor 1 5%
Other 0 0%
Unknown 4 19%
Readers by discipline Count As %
Agricultural and Biological Sciences 15 71%
Biochemistry, Genetics and Molecular Biology 2 10%
Unknown 4 19%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 January 2015.
All research outputs
#21,141,111
of 23,794,258 outputs
Outputs from Theoretical and Applied Genetics
#3,320
of 3,565 outputs
Outputs of similar age
#191,617
of 222,378 outputs
Outputs of similar age from Theoretical and Applied Genetics
#17
of 24 outputs
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