Title |
Complete genome sequence of yacon necrotic mottle virus, a novel putative member of the genus Badnavirus
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Published in |
Archives of Virology, February 2015
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DOI | 10.1007/s00705-015-2341-2 |
Pubmed ID | |
Authors |
Ye-Ji Lee, Hae-Ryun Kwak, Young-Kee Lee, Mi-Kyeong Kim, Hong-Soo Choi, Jang-Kyun Seo |
Abstract |
The complete genome sequence of a previously undescribed virus isolated from a yacon plant exhibiting necrotic mottle, chlorosis, stunting, and leaf malformation symptoms in Gyeongju, Korea, was determined. The genome of this virus consists of one circular double-stranded DNA of 7661 bp in size. The genome contained four open reading frames (ORFs 1 to 4) on the plus strand that potentially encode proteins of 26, 32, 234, and 25 kDa. Protein BLAST analysis showed that ORF3, which is the largest ORF, has 45 % amino acid sequence identity (with 89 % coverage) to the ORF3 of fig badnavirus 1 (FBV-1), a recently identified badnavirus. Phylogenetic analysis provided further evidence that the virus identified in this study is probably a member of a new species in the genus Badnavirus. The name yacon necrotic mottle virus (YNMoV) is proposed for this new virus. |
X Demographics
Geographical breakdown
Country | Count | As % |
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Unknown | 1 | 100% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 1 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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Japan | 1 | 4% |
Unknown | 26 | 96% |
Demographic breakdown
Readers by professional status | Count | As % |
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Researcher | 8 | 30% |
Student > Ph. D. Student | 7 | 26% |
Student > Bachelor | 2 | 7% |
Professor | 2 | 7% |
Other | 1 | 4% |
Other | 2 | 7% |
Unknown | 5 | 19% |
Readers by discipline | Count | As % |
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Agricultural and Biological Sciences | 10 | 37% |
Biochemistry, Genetics and Molecular Biology | 3 | 11% |
Pharmacology, Toxicology and Pharmaceutical Science | 2 | 7% |
Environmental Science | 1 | 4% |
Chemical Engineering | 1 | 4% |
Other | 2 | 7% |
Unknown | 8 | 30% |