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A fast and sensitive activity assay for lytic polysaccharide monooxygenase

Overview of attention for article published in Biotechnology for Biofuels and Bioproducts, March 2018
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281 Mendeley
Title
A fast and sensitive activity assay for lytic polysaccharide monooxygenase
Published in
Biotechnology for Biofuels and Bioproducts, March 2018
DOI 10.1186/s13068-018-1063-6
Pubmed ID
Authors

Erik Breslmayr, Marija Hanžek, Aoife Hanrahan, Christian Leitner, Roman Kittl, Božidar Šantek, Chris Oostenbrink, Roland Ludwig

Abstract

Lytic polysaccharide monooxygenases (LPMO) release a spectrum of cleavage products from their polymeric substrates cellulose, hemicellulose, or chitin. The correct identification and quantitation of these released products is the basis of MS/HPLC-based detection methods for LPMO activity. The duration, effort, and intricate analysis allow only specialized laboratories to measure LPMO activity in day-to-day work. A spectrophotometric assay will simplify the screening for LPMO in culture supernatants, help monitor recombinant LPMO expression and purification, and support enzyme characterization. Based on a newly discovered peroxidase activity of LPMO, we propose a fast, robust, and sensitive spectrophotometric activity assay using 2,6-dimethoxyphenol (2,6-DMP) and H2O2. The fast enzymatic assay (300 s) consists of 1 mM 2,6-DMP as chromogenic substrate, 100 µM H2O2 as cosubstrate, and an adequate activity of LPMO in a suitable buffer. The high molar absorption coefficient of the formed product coerulignone (ε469 = 53,200 M-1 cm-1) makes the assay sensitive and allows reliable activity measurements of LPMO in concentrations of approx. 0.5-50 mg L-1. The activity assay based on 2,6-DMP detects a novel peroxidase activity of LPMO. This activity can be accurately measured and used for enzyme screening, production, and purification, and can also be applied to study binding constants or thermal stability. However, the assay has to be used with care in crude extracts, because other enzymes such as laccase or peroxidase will interfere with the assay. We also want to stress that the peroxidase activity is a homogeneous reaction with soluble substrates and should not be correlated to heterogeneous LPMO activity on polymeric substrates.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 281 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 281 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 47 17%
Student > Master 41 15%
Researcher 33 12%
Student > Bachelor 32 11%
Student > Doctoral Student 9 3%
Other 33 12%
Unknown 86 31%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 76 27%
Agricultural and Biological Sciences 44 16%
Chemistry 27 10%
Chemical Engineering 8 3%
Engineering 6 2%
Other 20 7%
Unknown 100 36%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 21 December 2018.
All research outputs
#16,728,456
of 25,382,440 outputs
Outputs from Biotechnology for Biofuels and Bioproducts
#944
of 1,578 outputs
Outputs of similar age
#212,862
of 346,639 outputs
Outputs of similar age from Biotechnology for Biofuels and Bioproducts
#27
of 54 outputs
Altmetric has tracked 25,382,440 research outputs across all sources so far. This one is in the 32nd percentile – i.e., 32% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,578 research outputs from this source. They receive a mean Attention Score of 4.9. This one is in the 37th percentile – i.e., 37% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 346,639 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 35th percentile – i.e., 35% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 54 others from the same source and published within six weeks on either side of this one. This one is in the 44th percentile – i.e., 44% of its contemporaries scored the same or lower than it.