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Exploring native genetic elements as plug-in tools for synthetic biology in the cyanobacterium Synechocystis sp. PCC 6803

Overview of attention for article published in Microbial Cell Factories, March 2018
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Title
Exploring native genetic elements as plug-in tools for synthetic biology in the cyanobacterium Synechocystis sp. PCC 6803
Published in
Microbial Cell Factories, March 2018
DOI 10.1186/s12934-018-0897-8
Pubmed ID
Authors

Deng Liu, Himadri B. Pakrasi

Abstract

The unicellular cyanobacterium Synechocystis sp. PCC 6803 has been widely used as a photoautotrophic host for synthetic biology studies. However, as a green chassis to capture CO2for biotechnological applications, the genetic toolbox for Synechocystis 6803 is still a limited factor. We systematically characterized endogenous genetic elements of Synechocystis 6803, including promoters, ribosome binding sites, transcription terminators, and plasmids. Expression from twelve native promoters was compared by measuring fluorescence from the reporter protein EYFP in an identical setup, exhibiting an 8000-fold range of promoter activities. Moreover, we measured the strength of twenty native ribosome binding sites and eight native terminators, indicating their influence on the expression of the reporter genes. In addition, two shuttle vectors, pCA-UC118 and pCB-SC101, capable of replication in both Synechocystis 6803 and E. coli were constructed. Expression of reporter proteins were significantly enhanced in cells containing these new plasmids, thus providing superior gene expression platforms in this cyanobacterium. The results of this study provide useful and well characterized native tools for bioengineering work in the model cyanobacterium Synechocystis 6803.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 148 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 148 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 31 21%
Student > Master 22 15%
Researcher 21 14%
Student > Bachelor 18 12%
Student > Doctoral Student 6 4%
Other 10 7%
Unknown 40 27%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 58 39%
Agricultural and Biological Sciences 28 19%
Engineering 5 3%
Chemical Engineering 3 2%
Chemistry 2 1%
Other 6 4%
Unknown 46 31%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 13 April 2018.
All research outputs
#14,381,804
of 23,031,582 outputs
Outputs from Microbial Cell Factories
#883
of 1,613 outputs
Outputs of similar age
#187,520
of 330,380 outputs
Outputs of similar age from Microbial Cell Factories
#21
of 35 outputs
Altmetric has tracked 23,031,582 research outputs across all sources so far. This one is in the 35th percentile – i.e., 35% of other outputs scored the same or lower than it.
So far Altmetric has tracked 1,613 research outputs from this source. They receive a mean Attention Score of 4.4. This one is in the 42nd percentile – i.e., 42% of its peers scored the same or lower than it.
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We're also able to compare this research output to 35 others from the same source and published within six weeks on either side of this one. This one is in the 40th percentile – i.e., 40% of its contemporaries scored the same or lower than it.