Pattern Recognition in Bioinformatics

Table of Contents

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   Book Overview
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   Chapter 1 A Fast Agglomerative Community Detection Method for Protein Complex Discovery in Protein Interaction Networks
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   Chapter 2 Inferring Gene Regulatory Networks from Time-Series Expressions Using Random Forests Ensemble
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   Chapter 3 Local Topological Signatures for Network-Based Prediction of Biological Function
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   Chapter 4 Mutational Genomics for Cancer Pathway Discovery
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   Chapter 5 Outlier Gene Set Analysis Combined with Top Scoring Pair Provides Robust Biomarkers of Pathway Activity
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   Chapter 6 Restricted Neighborhood Search Clustering Revisited: An Evolutionary Computation Perspective
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   Chapter 7 Class Dependent Feature Weighting and K-Nearest Neighbor Classification
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   Chapter 8 Simultaneous Sample and Gene Selection Using T-score and Approximate Support Vectors
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    Chapter 9 Versatile Sparse Matrix Factorization and Its Applications in High-Dimensional Biological Data Analysis
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    Chapter 10 A Local Structural Prediction Algorithm for RNA Triple Helix Structure
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    Chapter 11 Combining Protein Fragment Feature-Based Resampling and Local Optimisation
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    Chapter 12 Experimental Determination of Intrinsic Drosophila Embryo Coordinates by Evolutionary Computation
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    Chapter 13 Identifying Informative Genes for Prediction of Breast Cancer Subtypes
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    Chapter 14 Predicting Therapeutic Targets with Integration of Heterogeneous Data Sources
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    Chapter 15 Using Predictive Models to Engineer Biology: A Case Study in Codon Optimization
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    Chapter 16 Active Learning for Protein Function Prediction in Protein-Protein Interaction Networks
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    Chapter 17 Conditional Random Fields for Protein Function Prediction
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    Chapter 18 Enhancing Protein Fold Prediction Accuracy Using Evolutionary and Structural Features
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    Chapter 19 Exploring Potential Discriminatory Information Embedded in PSSM to Enhance Protein Structural Class Prediction Accuracy
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    Chapter 20 Inferring the Association Network from p53 Sequence Alignment Using Granular Evaluations
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    Chapter 21 Prediction of Non-genotoxic Hepatocarcinogenicity Using Chemical-Protein Interactions
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    Chapter 22 A Structure Based Algorithm for Improving Motifs Prediction
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    Chapter 23 A Workflow for the Prediction of the Effects of Residue Substitution on Protein Stability
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    Chapter 24 Estimating Viral Haplotypes in a Population Using k-mer Counting
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    Chapter 25 Fast Computation of Entropic Profiles for the Detection of Conservation in Genomes