Bioinformatics Research and Applications

Table of Contents

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   Book Overview
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   Chapter 1 Predicting Disease Risks Using Feature Selection Based on Random Forest and Support Vector Machine
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   Chapter 2 Phylogenetic Bias in the Likelihood Method Caused by Missing Data Coupled with Among-Site Rate Variation: An Analytical Approach
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   Chapter 3 An Eigendecomposition Method for Protein Structure Alignment
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   Chapter 4 Functional Interplay between Hemagglutinin and Neuraminidase of Pandemic 2009 H1N1 from the Perspective of Virus Evolution
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   Chapter 5 Predicting Protein Submitochondrial Locations Using a K-Nearest Neighbors Method Based on the Bit-Score Weighted Euclidean Distance
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   Chapter 6 Algorithms Implemented for Cancer Gene Searching and Classifications
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   Chapter 7 Dysregulated microRNA Profile in HeLa Cell Lines Induced by Lupeol
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   Chapter 8 A Simulation for Proportional Biological Operational Mu-Circuit
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    Chapter 9 Computational Prediction of Human Saliva-Secreted Proteins
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    Chapter 10 A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field Electron Tomography
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    Chapter 11 An Improved Correlation Method Based on Rotation Invariant Feature for Automatic Particle Selection
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    Chapter 12 An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra
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    Chapter 13 Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding
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    Chapter 14 Multiple RNA Interaction with Sub-optimal Solutions
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    Chapter 15 Application of Consensus String Matching in the Diagnosis of Allelic Heterogeneity
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    Chapter 16 Continuous Time Bayesian Networks for Gene Network Reconstruction: A Comparative Study on Time Course Data
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    Chapter 17 Drug Target Identification Based on Structural Output Controllability of Complex Networks
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    Chapter 18 NovoGMET: De Novo Peptide Sequencing Using Graphs with Multiple Edge Types (GMET) for ETD/ECD Spectra
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    Chapter 19 Duplication Cost Diameters
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    Chapter 20 Computational Identification of De-Centric Genetic Regulatory Relationships from Functional Genomic Data
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    Chapter 21 Classification of Mutations by Functional Impact Type: Gain of Function, Loss of Function, and Switch of Function
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    Chapter 22 Network Analysis of Human Disease Comorbidity Patterns Based on Large-Scale Data Mining
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    Chapter 23 Identification of Essential Proteins by Using Complexes and Interaction Network
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    Chapter 24 GenoScan: Genomic Scanner for Putative miRNA Precursors
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    Chapter 25 Searching SNP Combinations Related to Evolutionary Information of Human Populations on HapMap Data
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    Chapter 26 2D Pharmacophore Query Generation
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    Chapter 27 Structure-Based Analysis of Protein Binding Pockets Using Von Neumann Entropy
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    Chapter 28 A New Mathematical Model for Inbreeding Depression in Large Populations
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    Chapter 29 dSpliceType: A Multivariate Model for Detecting Various Types of Differential Splicing Events Using RNA-Seq
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    Chapter 30 Conformational Transitions and Principal Geodesic Analysis on the Positive Semidefinite Matrix Manifold
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    Chapter 31 Joint Analysis of Functional and Phylogenetic Composition for Human Microbiome Data
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    Chapter 32 schematikon : Detailed Sequence-Structure Relationships from Mining a Non-redundant Protein Structure Database