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Amplification of plant genomic DNA by Phi29 DNA polymerase for use in physical mapping of the hypermethylated genomic region

Overview of attention for article published in Plant Cell Reports, May 2004
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12 Mendeley
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Title
Amplification of plant genomic DNA by Phi29 DNA polymerase for use in physical mapping of the hypermethylated genomic region
Published in
Plant Cell Reports, May 2004
DOI 10.1007/s00299-004-0806-y
Pubmed ID
Authors

E. Adachi, K. Shimamura, S. Wakamatsu, H. Kodama

Abstract

Plant genomes contain a heavily methylated region in which cytosines are methylated in both the symmetrical and asymmetrical sequences. The physical mapping of such a hypermethylated region is difficult because many restriction enzymes are sensitive to methylated cytosine residues in their recognition sites. The Phi29 DNA polymerase provides an efficient and representative amplification of the genomic DNA that is methylation-free. Using this amplified genomic DNA, we were able to show that a heavily methylated genomic DNA region becomes amenable to physical mapping with any restriction enzymes. This protocol will be especially useful for analysis of the heavily methylated region of plant genomes.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 12 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Bolivia, Plurinational State of 1 8%
Netherlands 1 8%
Unknown 10 83%

Demographic breakdown

Readers by professional status Count As %
Student > Doctoral Student 2 17%
Student > Ph. D. Student 2 17%
Professor > Associate Professor 2 17%
Researcher 2 17%
Professor 1 8%
Other 2 17%
Unknown 1 8%
Readers by discipline Count As %
Agricultural and Biological Sciences 9 75%
Biochemistry, Genetics and Molecular Biology 1 8%
Unknown 2 17%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 10 November 2010.
All research outputs
#7,454,951
of 22,790,780 outputs
Outputs from Plant Cell Reports
#771
of 2,182 outputs
Outputs of similar age
#18,660
of 57,753 outputs
Outputs of similar age from Plant Cell Reports
#5
of 13 outputs
Altmetric has tracked 22,790,780 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 2,182 research outputs from this source. They receive a mean Attention Score of 4.1. This one is in the 34th percentile – i.e., 34% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 57,753 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 12th percentile – i.e., 12% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 13 others from the same source and published within six weeks on either side of this one. This one is in the 15th percentile – i.e., 15% of its contemporaries scored the same or lower than it.