| Title |
Complete genome sequence of Pseudomonas fluorescens strain PICF7, an indigenous root endophyte from olive (Olea europaea L.) and effective biocontrol agent against Verticillium dahliae
|
|---|---|
| Published in |
Environmental Microbiome, February 2015
|
| DOI | 10.1186/1944-3277-10-10 |
| Pubmed ID | |
| Authors |
Pedro Manuel Martínez-García, David Ruano-Rosa, Elisabetta Schilirò, Pilar Prieto, Cayo Ramos, Pablo Rodríguez-Palenzuela, Jesús Mercado-Blanco |
| Abstract |
Pseudomonas fluorescens strain PICF7 is a native endophyte of olive roots. Previous studies have shown this motile, Gram-negative, non-sporulating bacterium is an effective biocontrol agent against the soil-borne fungus Verticillium dahliae, the causal agent of one of the most devastating diseases for olive (Olea europaea L.) cultivation. Here, we announce and describe the complete genome sequence of Pseudomonas fluorescens strain PICF7 consisting of a circular chromosome of 6,136,735 bp that encodes 5,567 protein-coding genes and 88 RNA-only encoding genes. Genome analysis revealed genes predicting factors such as secretion systems, siderophores, detoxifying compounds or volatile components. Further analysis of the genome sequence of PICF7 will help in gaining insights into biocontrol and endophytism. |
X Demographics
The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Unknown | 2 | 100% |
Demographic breakdown
| Type | Count | As % |
|---|---|---|
| Members of the public | 2 | 100% |
Mendeley readers
The data shown below were compiled from readership statistics for 93 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Unknown | 93 | 100% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Researcher | 20 | 22% |
| Student > Ph. D. Student | 18 | 19% |
| Student > Bachelor | 10 | 11% |
| Student > Doctoral Student | 7 | 8% |
| Other | 6 | 6% |
| Other | 14 | 15% |
| Unknown | 18 | 19% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 40 | 43% |
| Biochemistry, Genetics and Molecular Biology | 14 | 15% |
| Environmental Science | 5 | 5% |
| Immunology and Microbiology | 3 | 3% |
| Medicine and Dentistry | 2 | 2% |
| Other | 4 | 4% |
| Unknown | 25 | 27% |
Attention Score in Context
This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 17 February 2015.
All research outputs
#15,169,543
of 25,374,647 outputs
Outputs from Environmental Microbiome
#425
of 786 outputs
Outputs of similar age
#187,179
of 360,806 outputs
Outputs of similar age from Environmental Microbiome
#3
of 9 outputs
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