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Functional non-coding RNAs derived from the flavivirus 3′ untranslated region

Overview of attention for article published in Virus Research, February 2015
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (87th percentile)
  • High Attention Score compared to outputs of the same age and source (94th percentile)

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1 X user
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3 patents
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1 Wikipedia page
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Citations

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100 Dimensions

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215 Mendeley
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Title
Functional non-coding RNAs derived from the flavivirus 3′ untranslated region
Published in
Virus Research, February 2015
DOI 10.1016/j.virusres.2015.01.026
Pubmed ID
Authors

B.D. Clarke, J.A. Roby, A. Slonchak, A.A. Khromykh

Abstract

Flaviviruses are single-stranded positive sense RNA enveloped viruses. The flavivirus genus includes important human pathogens such as dengue virus (DENV), West Nile virus (WNV), yellow fever virus (YFV), Japanese encephalitis virus (JEV), tick-borne encephalitis virus (TBEV), and Murray Valley encephalitis virus (MVEV). In addition to the viral proteins and viral genomic RNA, flaviviruses produce at least two functional non-coding RNAs derived from the 3' untranslated region (3'UTR), the subgenomic flavivirus RNA (sfRNA) and a putative WNV miRNA (KUN-miR-1). In this review we summarize published data from studies with WNV, YFV, DENV, JEV, and MVEV on sfRNA production following incomplete degradation of the viral genomic RNA by the cellular 5'-3' exoribonuclease 1 (XRN1), RNA structural elements involved in stalling XRN1 to generate sfRNA, and functions of sfRNA in modulating cellular mRNA decay and RNAi pathways as well as in modulating anti-viral type I interferon response. In addition, we also summarize data on the mechanisms of biogenesis of 3'UTR-derived KUN-miR-1 and its function in WNV replication in mosquito host, along with recent findings on a discovery of a second potential flaviviral miRNA vsRNA5, derived from the 3'UTR of DENV. This review thus summarizes the known mechanisms of generation and the functions of flaviviral 3'UTR-derived non-coding RNAs.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 215 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 2 <1%
United Kingdom 1 <1%
Unknown 212 99%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 42 20%
Student > Ph. D. Student 41 19%
Researcher 34 16%
Student > Master 33 15%
Student > Doctoral Student 12 6%
Other 23 11%
Unknown 30 14%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 76 35%
Agricultural and Biological Sciences 42 20%
Immunology and Microbiology 30 14%
Medicine and Dentistry 13 6%
Chemistry 7 3%
Other 15 7%
Unknown 32 15%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 11. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 July 2023.
All research outputs
#3,274,689
of 25,374,647 outputs
Outputs from Virus Research
#242
of 3,302 outputs
Outputs of similar age
#44,671
of 361,204 outputs
Outputs of similar age from Virus Research
#3
of 50 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. Compared to these this one has done well and is in the 86th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 3,302 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.9. This one has done particularly well, scoring higher than 92% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 361,204 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 87% of its contemporaries.
We're also able to compare this research output to 50 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 94% of its contemporaries.