↓ Skip to main content

HLA Typing

Overview of attention for book
Cover of 'HLA Typing'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 The Past, Present, and Future of HLA Typing in Transplantation
  3. Altmetric Badge
    Chapter 2 Role of Human Leukocyte Antigens (HLA) in Autoimmune Diseases
  4. Altmetric Badge
    Chapter 3 The IPD Databases: Cataloguing and Understanding Allele Variants
  5. Altmetric Badge
    Chapter 4 Allele Frequency Net Database
  6. Altmetric Badge
    Chapter 5 High-Resolution HLA-Typing by Next-Generation Sequencing of Randomly Fragmented Target DNA
  7. Altmetric Badge
    Chapter 6 High-Throughput Contiguous Full-Length Next-Generation Sequencing of HLA Class I and II Genes from 96 Donors in a Single MiSeq Run
  8. Altmetric Badge
    Chapter 7 Application of High-Throughput Next-Generation Sequencing for HLA Typing on Buccal Extracted DNA
  9. Altmetric Badge
    Chapter 8 Super High Resolution for Single Molecule-Sequence-Based Typing of Classical HLA Loci Using Ion Torrent PGM
  10. Altmetric Badge
    Chapter 9 High-Resolution Full-Length HLA Typing Method Using Third Generation (Pac-Bio SMRT) Sequencing Technology
  11. Altmetric Badge
    Chapter 10 Full-Length HLA Class I Genotyping with the MinION Nanopore Sequencer
  12. Altmetric Badge
    Chapter 11 Imputation-Based HLA Typing with SNPs in GWAS Studies
  13. Altmetric Badge
    Chapter 12 In Silico Typing of Classical and Non-classical HLA Alleles from Standard RNA-Seq Reads
  14. Altmetric Badge
    Chapter 13 PHLAT: Inference of High-Resolution HLA Types from RNA and Whole Exome Sequencing
  15. Altmetric Badge
    Chapter 14 Using Exome and Amplicon-Based Sequencing Data for High-Resolution HLA Typing with ATHLATES
  16. Altmetric Badge
    Chapter 15 HLA Typing from Short-Read Sequencing Data with OptiType
  17. Altmetric Badge
    Chapter 16 Comprehensive HLA Typing from a Current Allele Database Using Next-Generation Sequencing Data
  18. Altmetric Badge
    Chapter 17 Accurate Assembly and Typing of HLA using a Graph-Guided Assembler Kourami
  19. Altmetric Badge
    Chapter 18 AmpliSAS and AmpliHLA: Web Server Tools for MHC Typing of Non-Model Species and Human Using NGS Data
  20. Altmetric Badge
    Chapter 19 HLA Haplotype Frequency Estimation from Real-Life Data with the Hapl-o-Mat Software
Attention for Chapter 8: Super High Resolution for Single Molecule-Sequence-Based Typing of Classical HLA Loci Using Ion Torrent PGM
Altmetric Badge

About this Attention Score

  • Average Attention Score compared to outputs of the same age and source

Mentioned by

twitter
3 X users

Citations

dimensions_citation
10 Dimensions

Readers on

mendeley
6 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
Super High Resolution for Single Molecule-Sequence-Based Typing of Classical HLA Loci Using Ion Torrent PGM
Chapter number 8
Book title
HLA Typing
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-8546-3_8
Pubmed ID
Book ISBNs
978-1-4939-8545-6, 978-1-4939-8546-3
Authors

Takashi Shiina, Shingo Suzuki, Jerzy K. Kulski, Hidetoshi Inoko, Shiina, Takashi, Suzuki, Shingo, Kulski, Jerzy K., Inoko, Hidetoshi

Abstract

Super high resolution-single molecule-sequence-based typing (SS-SBT) is an HLA DNA typing method to the field 4 level of allelic resolution (formerly known as 8-digit typing) to efficiently detect novel and null alleles without phase ambiguity by combination of long ranged PCR amplification and next-generation sequencing (NGS) technologies. In this chapter, we describe three basic steps, long ranged PCR, NGS, and allele assignment.

X Demographics

X Demographics

The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 33%
Other 1 17%
Lecturer > Senior Lecturer 1 17%
Student > Ph. D. Student 1 17%
Student > Bachelor 1 17%
Other 0 0%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 2 33%
Agricultural and Biological Sciences 1 17%
Medicine and Dentistry 1 17%
Unknown 2 33%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 July 2018.
All research outputs
#15,533,651
of 23,085,832 outputs
Outputs from Methods in molecular biology
#5,410
of 13,205 outputs
Outputs of similar age
#270,117
of 442,628 outputs
Outputs of similar age from Methods in molecular biology
#596
of 1,499 outputs
Altmetric has tracked 23,085,832 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,205 research outputs from this source. They receive a mean Attention Score of 3.4. This one is in the 44th percentile – i.e., 44% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 442,628 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 29th percentile – i.e., 29% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 1,499 others from the same source and published within six weeks on either side of this one. This one is in the 42nd percentile – i.e., 42% of its contemporaries scored the same or lower than it.