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Mining expressed sequence tags of rapeseed (Brassica napus L.) to predict the drought responsive regulatory network

Overview of attention for article published in Physiology and Molecular Biology of Plants, July 2015
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  • Among the highest-scoring outputs from this source (#44 of 421)
  • Good Attention Score compared to outputs of the same age (67th percentile)
  • High Attention Score compared to outputs of the same age and source (83rd percentile)

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Title
Mining expressed sequence tags of rapeseed (Brassica napus L.) to predict the drought responsive regulatory network
Published in
Physiology and Molecular Biology of Plants, July 2015
DOI 10.1007/s12298-015-0311-5
Pubmed ID
Authors

Roohollah Shamloo-Dashtpagerdi, Hooman Razi, Esmaeil Ebrahimie

Abstract

It is of great significance to understand the regulatory mechanisms by which plants deal with drought stress. Two EST libraries derived from rapeseed (Brassica napus) leaves in non-stressed and drought stress conditions were analyzed in order to obtain the transcriptomic landscape of drought-exposed B. napus plants, and also to identify and characterize significant drought responsive regulatory genes and microRNAs. The functional ontology analysis revealed a substantial shift in the B. napus transcriptome to govern cellular drought responsiveness via different stress-activated mechanisms. The activity of transcription factor and protein kinase modules generally increased in response to drought stress. The 26 regulatory genes consisting of 17 transcription factor genes, eight protein kinase genes and one protein phosphatase gene were identified showing significant alterations in their expressions in response to drought stress. We also found the six microRNAs which were differentially expressed during drought stress supporting the involvement of a post-transcriptional level of regulation for B. napus drought response. The drought responsive regulatory network shed light on the significance of some regulatory components involved in biosynthesis and signaling of various plant hormones (abscisic acid, auxin and brassinosteroids), ubiquitin proteasome system, and signaling through Reactive Oxygen Species (ROS). Our findings suggested a complex and multi-level regulatory system modulating response to drought stress in B. napus.

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The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 19 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 1 5%
Unknown 18 95%

Demographic breakdown

Readers by professional status Count As %
Researcher 5 26%
Other 3 16%
Student > Ph. D. Student 3 16%
Student > Postgraduate 2 11%
Professor > Associate Professor 2 11%
Other 3 16%
Unknown 1 5%
Readers by discipline Count As %
Agricultural and Biological Sciences 10 53%
Engineering 2 11%
Biochemistry, Genetics and Molecular Biology 1 5%
Veterinary Science and Veterinary Medicine 1 5%
Computer Science 1 5%
Other 1 5%
Unknown 3 16%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 12 August 2015.
All research outputs
#7,140,617
of 23,318,744 outputs
Outputs from Physiology and Molecular Biology of Plants
#44
of 421 outputs
Outputs of similar age
#82,039
of 264,555 outputs
Outputs of similar age from Physiology and Molecular Biology of Plants
#2
of 6 outputs
Altmetric has tracked 23,318,744 research outputs across all sources so far. This one has received more attention than most of these and is in the 68th percentile.
So far Altmetric has tracked 421 research outputs from this source. They receive a mean Attention Score of 1.8. This one has done well, scoring higher than 89% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 264,555 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 67% of its contemporaries.
We're also able to compare this research output to 6 others from the same source and published within six weeks on either side of this one. This one has scored higher than 4 of them.