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Systems-based approaches enable identification of gene targets which improve the flavour profile of low-ethanol wine yeast strains

Overview of attention for article published in Metabolic Engineering, August 2018
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Title
Systems-based approaches enable identification of gene targets which improve the flavour profile of low-ethanol wine yeast strains
Published in
Metabolic Engineering, August 2018
DOI 10.1016/j.ymben.2018.08.006
Pubmed ID
Authors

Cristian Varela, Simon A. Schmidt, Anthony R. Borneman, Chi Nam Ignatius Pang, Jens O. Krömerx, Alamgir Khan, Xiaomin Song, Mark P. Hodson, Mark Solomon, Christine M. Mayr, Wade Hines, Isak S. Pretorius, Mark S. Baker, Ute Roessner, Meagan Mercurio, Paul A. Henschke, Marc R. Wilkins, Paul J. Chambers

Abstract

Metabolic engineering has been vital to the development of industrial microbes such as the yeast Saccharomyces cerevisiae. However, sequential rounds of modification are often needed to achieve particular industrial design targets. Systems biology approaches can aid in identifying genetic targets for modification through providing an integrated view of cellular physiology. Recently, research into the generation of commercial yeasts that can produce reduced-ethanol wines has resulted in metabolically-engineered strains of S. cerevisiae that are less efficient at producing ethanol from sugar. However, these modifications led to the concomitant production of off-flavour by-products. A combination of transcriptomics, proteomics and metabolomics was therefore used to investigate the physiological changes occurring in an engineered low-ethanol yeast strain during alcoholic fermentation. Integration of 'omics data identified several metabolic reactions, including those related to the pyruvate node and redox homeostasis, as being significantly affected by the low-ethanol engineering methodology, and highlighted acetaldehyde and 2,4,5-trimethyl-1,3-dioxolane as the main off-flavour compounds. Gene remediation strategies were then successfully applied to decrease the formation of these by-products, while maintaining the 'low-alcohol' phenotype. The data generated from this comprehensive systems-based study will inform wine yeast strain development programmes, which, in turn, could potentially play an important role in assisting winemakers in their endeavour to produce low-alcohol wines with desirable flavour profiles.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 74 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 74 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 16 22%
Student > Ph. D. Student 14 19%
Student > Master 7 9%
Student > Bachelor 7 9%
Student > Postgraduate 5 7%
Other 12 16%
Unknown 13 18%
Readers by discipline Count As %
Agricultural and Biological Sciences 27 36%
Biochemistry, Genetics and Molecular Biology 15 20%
Engineering 5 7%
Chemical Engineering 2 3%
Computer Science 2 3%
Other 3 4%
Unknown 20 27%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 September 2018.
All research outputs
#20,663,600
of 25,385,509 outputs
Outputs from Metabolic Engineering
#1,305
of 1,463 outputs
Outputs of similar age
#265,934
of 341,989 outputs
Outputs of similar age from Metabolic Engineering
#30
of 35 outputs
Altmetric has tracked 25,385,509 research outputs across all sources so far. This one is in the 10th percentile – i.e., 10% of other outputs scored the same or lower than it.
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We're also able to compare this research output to 35 others from the same source and published within six weeks on either side of this one. This one is in the 8th percentile – i.e., 8% of its contemporaries scored the same or lower than it.