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Characterization of a new phage, termed ϕA318, which is specific for Vibrio alginolyticus

Overview of attention for article published in Archives of Virology, February 2012
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Title
Characterization of a new phage, termed ϕA318, which is specific for Vibrio alginolyticus
Published in
Archives of Virology, February 2012
DOI 10.1007/s00705-012-1244-8
Pubmed ID
Authors

Ying-Rong Lin, Chi-Wen Chiu, Feng-Yi Chang, Chan-Shing Lin

Abstract

Vibrio alginolyticus is an opportunistic pathogen of animals and humans; its related strains can also produce tetrodotoxin and hemolysins. A new phage, ϕA318, which lysed its host V. alginolyticus with high efficiency, was characterized. The burst size of ϕA318 in V. alginolyticus was 72 PFU/bacterium at an MOI of 1 at room temperature; the plaque size was as large as 5 mm in diameter. Electron microscopy (EM) of the phage particles revealed a 50- to 55-nm isomorphous icosahedral head with a 12-nm non-contractile tail, similar to the T7-like phages of the family Podoviridae. Phylogenetic analysis based on complete sequences of the DNA-directed RNA polymerase gene revealed that ϕA318 had 28-47% amino acid identity to enterobacteria phages T7 and SP6, and other Vibrio phages, and the phylogenetic distance suggested that ϕA318 could be classified as a new T7-like bacteriophage. Nevertheless, several motifs in the ϕA318 phage RNA polymerase were highly conserved, including DFRGR (T7-421 motif), DG (T7-537 motif), PSEKPQDIYGAVS (T7-563 motif), RSMTKKPVMTL PYGS (T7-627 motif), and HDS (T7-811 motif). Genetic analysis indicated that phage ϕA318 is not a thermostable direct hemolysin producer. The results suggest that the MOI should be higher than 0.1 to prevent the chance of hemolysin production by the bacteria before they are lysed by the phage.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 31 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Greece 1 3%
Unknown 30 97%

Demographic breakdown

Readers by professional status Count As %
Student > Bachelor 6 19%
Student > Master 6 19%
Student > Ph. D. Student 5 16%
Researcher 4 13%
Student > Postgraduate 2 6%
Other 3 10%
Unknown 5 16%
Readers by discipline Count As %
Agricultural and Biological Sciences 11 35%
Biochemistry, Genetics and Molecular Biology 7 23%
Immunology and Microbiology 3 10%
Veterinary Science and Veterinary Medicine 1 3%
Computer Science 1 3%
Other 3 10%
Unknown 5 16%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 May 2019.
All research outputs
#7,412,654
of 22,662,201 outputs
Outputs from Archives of Virology
#914
of 4,130 outputs
Outputs of similar age
#72,435
of 249,060 outputs
Outputs of similar age from Archives of Virology
#11
of 22 outputs
Altmetric has tracked 22,662,201 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 4,130 research outputs from this source. They receive a mean Attention Score of 3.8. This one is in the 46th percentile – i.e., 46% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 249,060 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 43rd percentile – i.e., 43% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 22 others from the same source and published within six weeks on either side of this one. This one is in the 22nd percentile – i.e., 22% of its contemporaries scored the same or lower than it.