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UltraTrack: Software for semi-automated tracking of muscle fascicles in sequences of B-mode ultrasound images

Overview of attention for article published in Computer Methods & Programs in Biomedicine, March 2016
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  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (85th percentile)
  • High Attention Score compared to outputs of the same age and source (92nd percentile)

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Citations

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169 Dimensions

Readers on

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172 Mendeley
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Title
UltraTrack: Software for semi-automated tracking of muscle fascicles in sequences of B-mode ultrasound images
Published in
Computer Methods & Programs in Biomedicine, March 2016
DOI 10.1016/j.cmpb.2016.02.016
Pubmed ID
Authors

Dominic James Farris, Glen A. Lichtwark

Abstract

Dynamic measurements of human muscle fascicle length from sequences of B-mode ultrasound images have become increasingly prevalent in biomedical research. Manual digitisation of these images is time consuming and algorithms for automating the process have been developed. Here we present a freely available software implementation of a previously validated algorithm for semi-automated tracking of muscle fascicle length in dynamic ultrasound image recordings, "UltraTrack". UltraTrack implements an affine extension to an optic flow algorithm to track movement of the muscle fascicle end-points throughout dynamically recorded sequences of images. The underlying algorithm has been previously described and its reliability tested, but here we present the software implementation with features for: tracking multiple fascicles in multiple muscles simultaneously; correcting temporal drift in measurements; manually adjusting tracking results; saving and re-loading of tracking results and loading a range of file formats. Two example runs of the software are presented detailing the tracking of fascicles from several lower limb muscles during a squatting and walking activity. We have presented a software implementation of a validated fascicle-tracking algorithm and made the source code and standalone versions freely available for download.

X Demographics

X Demographics

The data shown below were collected from the profiles of 15 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 172 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Finland 1 <1%
United States 1 <1%
Unknown 170 99%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 35 20%
Student > Master 32 19%
Researcher 22 13%
Student > Bachelor 12 7%
Student > Doctoral Student 9 5%
Other 24 14%
Unknown 38 22%
Readers by discipline Count As %
Sports and Recreations 36 21%
Engineering 33 19%
Medicine and Dentistry 13 8%
Nursing and Health Professions 12 7%
Agricultural and Biological Sciences 6 3%
Other 19 11%
Unknown 53 31%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 12. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 27 June 2022.
All research outputs
#3,081,120
of 25,374,917 outputs
Outputs from Computer Methods & Programs in Biomedicine
#62
of 2,058 outputs
Outputs of similar age
#46,557
of 312,879 outputs
Outputs of similar age from Computer Methods & Programs in Biomedicine
#3
of 38 outputs
Altmetric has tracked 25,374,917 research outputs across all sources so far. Compared to these this one has done well and is in the 87th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 2,058 research outputs from this source. They receive a mean Attention Score of 3.3. This one has done particularly well, scoring higher than 96% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 312,879 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 85% of its contemporaries.
We're also able to compare this research output to 38 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 92% of its contemporaries.