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Missing Fragments: Detecting Cooperative Binding in Fragment-Based Drug Design

Overview of attention for article published in ACS Medicinal Chemistry Letters, February 2012
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Title
Missing Fragments: Detecting Cooperative Binding in Fragment-Based Drug Design
Published in
ACS Medicinal Chemistry Letters, February 2012
DOI 10.1021/ml300015u
Pubmed ID
Authors

Pramod C. Nair, Alpeshkumar K. Malde, Nyssa Drinkwater, Alan E. Mark

Abstract

The aim of fragment-based drug design (FBDD) is to identify molecular fragments that bind to alternate subsites within a given binding pocket leading to cooperative binding when linked. In this study, the binding of fragments to human phenylethanolamine N-methyltransferase is used to illustrate how (a) current protocols may fail to detect fragments that bind cooperatively, (b) theoretical approaches can be used to validate potential hits, and (c) apparent false positives obtained when screening against cocktails of fragments may in fact indicate promising leads.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 40 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Japan 1 3%
United Kingdom 1 3%
Czechia 1 3%
Unknown 37 93%

Demographic breakdown

Readers by professional status Count As %
Researcher 15 38%
Student > Ph. D. Student 10 25%
Student > Doctoral Student 4 10%
Student > Master 4 10%
Lecturer > Senior Lecturer 1 3%
Other 3 8%
Unknown 3 8%
Readers by discipline Count As %
Chemistry 22 55%
Biochemistry, Genetics and Molecular Biology 6 15%
Agricultural and Biological Sciences 3 8%
Computer Science 1 3%
Pharmacology, Toxicology and Pharmaceutical Science 1 3%
Other 2 5%
Unknown 5 13%