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Flexible models for spike count data with both over- and under- dispersion

Overview of attention for article published in Journal of Computational Neuroscience, March 2016
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  • High Attention Score compared to outputs of the same age and source (99th percentile)

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Title
Flexible models for spike count data with both over- and under- dispersion
Published in
Journal of Computational Neuroscience, March 2016
DOI 10.1007/s10827-016-0603-y
Pubmed ID
Authors

Ian H. Stevenson

Abstract

A key observation in systems neuroscience is that neural responses vary, even in controlled settings where stimuli are held constant. Many statistical models assume that trial-to-trial spike count variability is Poisson, but there is considerable evidence that neurons can be substantially more or less variable than Poisson depending on the stimuli, attentional state, and brain area. Here we examine a set of spike count models based on the Conway-Maxwell-Poisson (COM-Poisson) distribution that can flexibly account for both over- and under-dispersion in spike count data. We illustrate applications of this noise model for Bayesian estimation of tuning curves and peri-stimulus time histograms. We find that COM-Poisson models with group/observation-level dispersion, where spike count variability is a function of time or stimulus, produce more accurate descriptions of spike counts compared to Poisson models as well as negative-binomial models often used as alternatives. Since dispersion is one determinant of parameter standard errors, COM-Poisson models are also likely to yield more accurate model comparison. More generally, these methods provide a useful, model-based framework for inferring both the mean and variability of neural responses.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 41 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 2%
Unknown 40 98%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 14 34%
Researcher 11 27%
Student > Doctoral Student 4 10%
Professor 2 5%
Lecturer 2 5%
Other 6 15%
Unknown 2 5%
Readers by discipline Count As %
Neuroscience 15 37%
Agricultural and Biological Sciences 9 22%
Mathematics 4 10%
Computer Science 2 5%
Economics, Econometrics and Finance 1 2%
Other 6 15%
Unknown 4 10%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 5. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 09 May 2017.
All research outputs
#6,998,171
of 24,980,180 outputs
Outputs from Journal of Computational Neuroscience
#52
of 321 outputs
Outputs of similar age
#92,200
of 306,664 outputs
Outputs of similar age from Journal of Computational Neuroscience
#1
of 9 outputs
Altmetric has tracked 24,980,180 research outputs across all sources so far. This one has received more attention than most of these and is in the 71st percentile.
So far Altmetric has tracked 321 research outputs from this source. They receive a mean Attention Score of 3.5. This one has done well, scoring higher than 84% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 306,664 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 69% of its contemporaries.
We're also able to compare this research output to 9 others from the same source and published within six weeks on either side of this one. This one has scored higher than all of them