| Title |
The Structural Biology Knowledgebase: a portal to protein structures, sequences, functions, and methods
|
|---|---|
| Published in |
Journal of Structural and Functional Genomics, April 2011
|
| DOI | 10.1007/s10969-011-9106-2 |
| Pubmed ID | |
| Authors |
Margaret J. Gabanyi, Paul D. Adams, Konstantin Arnold, Lorenza Bordoli, Lester G. Carter, Judith Flippen-Andersen, Lida Gifford, Juergen Haas, Andrei Kouranov, William A. McLaughlin, David I. Micallef, Wladek Minor, Raship Shah, Torsten Schwede, Yi-Ping Tao, John D. Westbrook, Matthew Zimmerman, Helen M. Berman |
| Abstract |
The Protein Structure Initiative's Structural Biology Knowledgebase (SBKB, URL: http://sbkb.org ) is an open web resource designed to turn the products of the structural genomics and structural biology efforts into knowledge that can be used by the biological community to understand living systems and disease. Here we will present examples on how to use the SBKB to enable biological research. For example, a protein sequence or Protein Data Bank (PDB) structure ID search will provide a list of related protein structures in the PDB, associated biological descriptions (annotations), homology models, structural genomics protein target status, experimental protocols, and the ability to order available DNA clones from the PSI:Biology-Materials Repository. A text search will find publication and technology reports resulting from the PSI's high-throughput research efforts. Web tools that aid in research, including a system that accepts protein structure requests from the community, will also be described. Created in collaboration with the Nature Publishing Group, the Structural Biology Knowledgebase monthly update also provides a research library, editorials about new research advances, news, and an events calendar to present a broader view of structural genomics and structural biology. |
X Demographics
The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| United Kingdom | 1 | 50% |
| Unknown | 1 | 50% |
Demographic breakdown
| Type | Count | As % |
|---|---|---|
| Members of the public | 1 | 50% |
| Scientists | 1 | 50% |
Mendeley readers
The data shown below were compiled from readership statistics for 76 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| France | 3 | 4% |
| Canada | 3 | 4% |
| United Kingdom | 1 | 1% |
| Germany | 1 | 1% |
| United States | 1 | 1% |
| Luxembourg | 1 | 1% |
| Unknown | 66 | 87% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Researcher | 20 | 26% |
| Student > Ph. D. Student | 15 | 20% |
| Student > Bachelor | 13 | 17% |
| Professor | 7 | 9% |
| Student > Doctoral Student | 5 | 7% |
| Other | 12 | 16% |
| Unknown | 4 | 5% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 26 | 34% |
| Biochemistry, Genetics and Molecular Biology | 14 | 18% |
| Chemistry | 8 | 11% |
| Computer Science | 4 | 5% |
| Medicine and Dentistry | 4 | 5% |
| Other | 11 | 14% |
| Unknown | 9 | 12% |
Attention Score in Context
This research output has an Altmetric Attention Score of 13. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 November 2014.
All research outputs
#2,303,639
of 22,663,150 outputs
Outputs from Journal of Structural and Functional Genomics
#1
of 107 outputs
Outputs of similar age
#10,535
of 108,786 outputs
Outputs of similar age from Journal of Structural and Functional Genomics
#1
of 5 outputs
Altmetric has tracked 22,663,150 research outputs across all sources so far. Compared to these this one has done well and is in the 89th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 107 research outputs from this source. They receive a mean Attention Score of 3.3. This one has done particularly well, scoring higher than 99% of its peers.
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We're also able to compare this research output to 5 others from the same source and published within six weeks on either side of this one. This one has scored higher than all of them