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Medulloblastoma-associated DDX3 variant selectively alters the translational response to stress

Overview of attention for article published in Oncotarget, April 2016
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  • High Attention Score compared to outputs of the same age and source (82nd percentile)

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6 X users

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136 Mendeley
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1 CiteULike
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Article details
Title
Medulloblastoma-associated DDX3 variant selectively alters the translational response to stress
Published in
Oncotarget, April 2016
DOI 10.18632/oncotarget.8612
Pubmed ID
Authors
Abstract

DDX3X encodes a DEAD-box family RNA helicase (DDX3) commonly mutated in medulloblastoma, a highly aggressive cerebellar tumor affecting both children and adults. Despite being implicated in several facets of RNA metabolism, the nature and scope of DDX3's interactions with RNA remain unclear. Here, we show DDX3 collaborates extensively with the translation initiation machinery through direct binding to 5'UTRs of nearly all coding RNAs, specific sites on the 18S rRNA, and multiple components of the translation initiation complex. Impairment of translation initiation is also evident in primary medulloblastomas harboring mutations in DDX3X, further highlighting DDX3's role in this process. Arsenite-induced stress shifts DDX3 binding from the 5'UTR into the coding region of mRNAs concomitant with a general reduction of translation, and both the shift of DDX3 on mRNA and decreased translation are blunted by expression of a catalytically-impaired, medulloblastoma-associated DDX3R534H variant. Furthermore, despite the global repression of translation induced by arsenite, translation is preserved on select genes involved in chromatin organization in DDX3R534H-expressing cells. Thus, DDX3 interacts extensively with RNA and ribosomal machinery to help remodel the translation landscape in response to stress, while cancer-related DDX3 variants adapt this response to selectively preserve translation.

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X Demographics

X Demographics

The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 136 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
United States 1 <1%
Unknown 135 99%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 38 28%
Researcher 23 17%
Student > Master 9 7%
Student > Bachelor 8 6%
Other 7 5%
Other 12 9%
Unknown 39 29%
Readers by discipline
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 40 29%
Agricultural and Biological Sciences 28 21%
Immunology and Microbiology 7 5%
Medicine and Dentistry 5 4%
Chemistry 4 3%
Other 11 8%
Unknown 41 30%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 5. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 06 January 2018.
All research outputs
#7,521,512
of 27,479,873 outputs
Outputs from Oncotarget
#3,330
of 14,525 outputs
Outputs of similar age
#92,175
of 317,540 outputs
Outputs of similar age from Oncotarget
#222
of 1,270 outputs
Altmetric has tracked 27,479,873 research outputs across all sources so far. This one has received more attention than most of these and is in the 72nd percentile.
So far Altmetric has tracked 14,525 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 7.2. This one has done well, scoring higher than 76% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 317,540 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 70% of its contemporaries.
We're also able to compare this research output to 1,270 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 82% of its contemporaries.