Title |
AtlasCBS: a web server to map and explore chemico-biological space
|
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Published in |
Perspectives in Drug Discovery and Design, July 2012
|
DOI | 10.1007/s10822-012-9587-5 |
Pubmed ID | |
Authors |
Álvaro Cortés-Cabrera, Antonio Morreale, Federico Gago, Celerino Abad-Zapatero |
Abstract |
New approaches are needed that can help decrease the unsustainable failure in small-molecule drug discovery. Ligand Efficiency Indices (LEI) are making a great impact on early-stage compound selection and prioritization. Given a target-ligand database with chemical structures and associated biological affinities/activities for a target, the AtlasCBS server generates two-dimensional, dynamical representations of its contents in terms of LEI. These variables allow an effective decoupling of the chemical (angular) and biological (radial) components. BindingDB, PDBBind and ChEMBL databases are currently implemented. Proprietary datasets can also be uploaded and compared. The utility of this atlas-like representation in the future of drug design is highlighted with some examples. The web server can be accessed at http://ub.cbm.uam.es/atlascbs and https://www.ebi.ac.uk/chembl/atlascbs. |
X Demographics
Geographical breakdown
Country | Count | As % |
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United Kingdom | 1 | 100% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 1 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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United States | 1 | 5% |
Germany | 1 | 5% |
Romania | 1 | 5% |
Unknown | 16 | 84% |
Demographic breakdown
Readers by professional status | Count | As % |
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Researcher | 6 | 32% |
Student > Ph. D. Student | 4 | 21% |
Other | 2 | 11% |
Professor | 2 | 11% |
Student > Master | 2 | 11% |
Other | 3 | 16% |
Readers by discipline | Count | As % |
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Chemistry | 7 | 37% |
Agricultural and Biological Sciences | 4 | 21% |
Medicine and Dentistry | 3 | 16% |
Computer Science | 2 | 11% |
Social Sciences | 1 | 5% |
Other | 3 | 16% |