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Influence of ammonia oxidation rate on thaumarchaeal lipid composition and the TEX86 temperature proxy

Overview of attention for article published in Proceedings of the National Academy of Sciences of the United States of America, June 2016
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  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (90th percentile)
  • Above-average Attention Score compared to outputs of the same age and source (57th percentile)

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Title
Influence of ammonia oxidation rate on thaumarchaeal lipid composition and the TEX86 temperature proxy
Published in
Proceedings of the National Academy of Sciences of the United States of America, June 2016
DOI 10.1073/pnas.1518534113
Pubmed ID
Authors

Sarah J Hurley, Felix J Elling, Martin Könneke, Carolyn Buchwald, Scott D Wankel, Alyson E Santoro, Julius Sebastian Lipp, Kai-Uwe Hinrichs, Ann Pearson

Abstract

Archaeal membrane lipids known as glycerol dibiphytanyl glycerol tetraethers (GDGTs) are the basis of the TEX86 paleotemperature proxy. Because GDGTs preserved in marine sediments are thought to originate mainly from planktonic, ammonia-oxidizing Thaumarchaeota, the basis of the correlation between TEX86 and sea surface temperature (SST) remains unresolved: How does TEX86 predict surface temperatures, when maximum thaumarchaeal activity occurs below the surface mixed layer and TEX86 does not covary with in situ growth temperatures? Here we used isothermal studies of the model thaumarchaeon Nitrosopumilus maritimus SCM1 to investigate how GDGT composition changes in response to ammonia oxidation rate. We used continuous culture methods to avoid potential confounding variables that can be associated with experiments in batch cultures. The results show that the ring index scales inversely (R(2) = 0.82) with ammonia oxidation rate (ϕ), indicating that GDGT cyclization depends on available reducing power. Correspondingly, the TEX86 ratio decreases by an equivalent of 5.4 °C of calculated temperature over a 5.5 fmol·cell(-1)·d(-1) increase in ϕ. This finding reconciles other recent experiments that have identified growth stage and oxygen availability as variables affecting TEX86 Depth profiles from the marine water column show minimum TEX86 values at the depth of maximum nitrification rates, consistent with our chemostat results. Our findings suggest that the TEX86 signal exported from the water column is influenced by the dynamics of ammonia oxidation. Thus, the global TEX86-SST calibration potentially represents a composite of regional correlations based on nutrient dynamics and global correlations based on archaeal community composition and temperature.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 152 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 1%
Netherlands 1 <1%
Canada 1 <1%
Unknown 148 97%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 51 34%
Student > Master 21 14%
Researcher 20 13%
Student > Bachelor 10 7%
Student > Doctoral Student 10 7%
Other 13 9%
Unknown 27 18%
Readers by discipline Count As %
Earth and Planetary Sciences 67 44%
Environmental Science 16 11%
Biochemistry, Genetics and Molecular Biology 7 5%
Agricultural and Biological Sciences 7 5%
Engineering 3 2%
Other 9 6%
Unknown 43 28%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 20. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 07 October 2016.
All research outputs
#1,792,413
of 24,625,114 outputs
Outputs from Proceedings of the National Academy of Sciences of the United States of America
#22,880
of 101,438 outputs
Outputs of similar age
#32,519
of 358,746 outputs
Outputs of similar age from Proceedings of the National Academy of Sciences of the United States of America
#375
of 878 outputs
Altmetric has tracked 24,625,114 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 92nd percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 101,438 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 38.8. This one has done well, scoring higher than 77% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 358,746 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 90% of its contemporaries.
We're also able to compare this research output to 878 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 57% of its contemporaries.