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NCBI BLAST+ integrated into Galaxy

Overview of attention for article published in Giga Science, August 2015
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (93rd percentile)
  • Above-average Attention Score compared to outputs of the same age and source (56th percentile)

Mentioned by

blogs
1 blog
twitter
22 X users
peer_reviews
1 peer review site
facebook
1 Facebook page
wikipedia
1 Wikipedia page
googleplus
2 Google+ users

Readers on

mendeley
262 Mendeley
citeulike
3 CiteULike
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Article details
Title
NCBI BLAST+ integrated into Galaxy
Published in
Giga Science, August 2015
DOI 10.1186/s13742-015-0080-7
Pubmed ID
Authors
Abstract

The NCBI BLAST suite has become ubiquitous in modern molecular biology and is used for small tasks such as checking capillary sequencing results of single PCR products, genome annotation or even larger scale pan-genome analyses. For early adopters of the Galaxy web-based biomedical data analysis platform, integrating BLAST into Galaxy was a natural step for sequence comparison workflows. The command line NCBI BLAST+ tool suite was wrapped for use within Galaxy. Appropriate datatypes were defined as needed. The integration of the BLAST+ tool suite into Galaxy has the goal of making common BLAST tasks easy and advanced tasks possible. This project is an informal international collaborative effort, and is deployed and used on Galaxy servers worldwide. Several examples of applications are described here.

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X Demographics

X Demographics

The data shown below were collected from the profiles of 22 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 262 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
United States 2 <1%
Netherlands 1 <1%
Spain 1 <1%
Germany 1 <1%
China 1 <1%
Canada 1 <1%
Brazil 1 <1%
Unknown 254 97%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 35 13%
Student > Bachelor 33 13%
Student > Ph. D. Student 30 11%
Student > Master 29 11%
Student > Doctoral Student 15 6%
Other 29 11%
Unknown 91 35%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 61 23%
Biochemistry, Genetics and Molecular Biology 56 21%
Immunology and Microbiology 12 5%
Computer Science 11 4%
Engineering 6 2%
Other 17 6%
Unknown 99 38%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 26. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 30 April 2026.
All research outputs
#1,878,875
of 34,359,530 outputs
Outputs from Giga Science
#274
of 1,496 outputs
Outputs of similar age
#19,344
of 304,057 outputs
Outputs of similar age from Giga Science
#7
of 16 outputs
Altmetric has tracked 34,359,530 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 94th percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 1,496 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 18.2. This one has done well, scoring higher than 81% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 304,057 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 93% of its contemporaries.
We're also able to compare this research output to 16 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 56% of its contemporaries.