Title |
Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil
|
---|---|
Published in |
Brazilian Journal of Microbiology, February 2017
|
DOI | 10.1016/j.bjm.2016.11.010 |
Pubmed ID | |
Authors |
Ricardo Rodrigues de Melo, Gabriela Felix Persinoti, Douglas Antonio Alvaredo Paixão, Fábio Márcio Squina, Roberto Ruller, Helia Harumi Sato |
Abstract |
Here, we show the draft genome sequence of Streptomyces sp. F1, a strain isolated from soil with great potential for secretion of hydrolytic enzymes used to deconstruct cellulosic biomass. The draft genome assembly of Streptomyces sp. strain F1 has 69 contigs with a total genome size of 8,142,296bp and G+C 72.65%. Preliminary genome analysis identified 175 proteins as Carbohydrate-Active Enzymes, being 85 glycoside hydrolases organized in 33 distinct families. This draft genome information provides new insights on the key genes encoding hydrolytic enzymes involved in biomass deconstruction employed by soil bacteria. |
X Demographics
Geographical breakdown
Country | Count | As % |
---|---|---|
United Kingdom | 1 | 100% |
Demographic breakdown
Type | Count | As % |
---|---|---|
Members of the public | 1 | 100% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 20 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Master | 5 | 25% |
Student > Bachelor | 5 | 25% |
Student > Doctoral Student | 1 | 5% |
Student > Ph. D. Student | 1 | 5% |
Researcher | 1 | 5% |
Other | 0 | 0% |
Unknown | 7 | 35% |
Readers by discipline | Count | As % |
---|---|---|
Biochemistry, Genetics and Molecular Biology | 5 | 25% |
Agricultural and Biological Sciences | 3 | 15% |
Pharmacology, Toxicology and Pharmaceutical Science | 1 | 5% |
Chemical Engineering | 1 | 5% |
Medicine and Dentistry | 1 | 5% |
Other | 0 | 0% |
Unknown | 9 | 45% |