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Structural basis for DNA recognition and loading into a viral packaging motor

Overview of attention for article published in Proceedings of the National Academy of Sciences of the United States of America, December 2011
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87 Mendeley
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Article details
Title
Structural basis for DNA recognition and loading into a viral packaging motor
Published in
Proceedings of the National Academy of Sciences of the United States of America, December 2011
DOI 10.1073/pnas.1110270109
Pubmed ID
Authors
Abstract

Genome packaging into preformed viral procapsids is driven by powerful molecular motors. The small terminase protein is essential for the initial recognition of viral DNA and regulates the motor's ATPase and nuclease activities during DNA translocation. The crystal structure of a full-length small terminase protein from the Siphoviridae bacteriophage SF6, comprising the N-terminal DNA binding, the oligomerization core, and the C-terminal β-barrel domains, reveals a nine-subunit circular assembly in which the DNA-binding domains are arranged around the oligomerization core in a highly flexible manner. Mass spectrometry analysis and four further crystal structures show that, although the full-length protein exclusively forms nine-subunit assemblies, protein constructs missing the C-terminal β-barrel form both nine-subunit and ten-subunit assemblies, indicating the importance of the C terminus for defining the oligomeric state. The mechanism by which a ring-shaped small terminase oligomer binds viral DNA has not previously been elucidated. Here, we probed binding in vitro by using EPR and surface plasmon resonance experiments, which indicated that interaction with DNA is mediated exclusively by the DNA-binding domains and suggested a nucleosome-like model in which DNA binds around the outside of the protein oligomer.

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X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 87 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
United States 3 3%
Taiwan 1 1%
Japan 1 1%
Israel 1 1%
United Kingdom 1 1%
France 1 1%
Unknown 79 91%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 22 25%
Student > Ph. D. Student 21 24%
Professor 6 7%
Student > Master 6 7%
Professor > Associate Professor 6 7%
Other 15 17%
Unknown 11 13%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 29 33%
Biochemistry, Genetics and Molecular Biology 19 22%
Chemistry 14 16%
Physics and Astronomy 7 8%
Immunology and Microbiology 2 2%
Other 4 5%
Unknown 12 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 19 March 2026.
All research outputs
#10,721,406
of 34,400,738 outputs
Outputs from Proceedings of the National Academy of Sciences of the United States of America
#78,805
of 118,992 outputs
Outputs of similar age
#84,477
of 304,308 outputs
Outputs of similar age from Proceedings of the National Academy of Sciences of the United States of America
#567
of 878 outputs
Altmetric has tracked 34,400,738 research outputs across all sources so far. This one has received more attention than most of these and is in the 67th percentile.
So far Altmetric has tracked 118,992 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 40.1. This one is in the 32nd percentile – i.e., 32% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 304,308 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 70% of its contemporaries.
We're also able to compare this research output to 878 others from the same source and published within six weeks on either side of this one. This one is in the 32nd percentile – i.e., 32% of its contemporaries scored the same or lower than it.