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Quantification of algal endosymbionts (Symbiodinium) in coral tissue using real‐time PCR

Overview of attention for article published in Molecular Ecology Resources, January 2009
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About this Attention Score

  • Good Attention Score compared to outputs of the same age (74th percentile)
  • Above-average Attention Score compared to outputs of the same age and source (62nd percentile)

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1 blog

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225 Mendeley
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Article details
Title
Quantification of algal endosymbionts (Symbiodinium) in coral tissue using real‐time PCR
Published in
Molecular Ecology Resources, January 2009
DOI 10.1111/j.1755-0998.2008.02222.x
Pubmed ID
Authors
Abstract

Understanding the flexibility of the endosymbioses between scleractinian corals and single-cell algae of the genus Symbiodinium will provide valuable insights into the future of coral reefs. Here, a real-time polymerase chain reaction (PCR) assay is presented to accurately determine the cell densities of Symbiodinium clades C and D in the scleractinian coral Acropora millepora, which can be extended to other coral-symbiont associations in the future. The assay targets single- to low-copy genes of the actin family of both the coral host and algal symbiont. Symbiont densities are expressed as the ratio of Symbiodinium cells to each host cell (S/H ratio, error within 30%), but can also be normalized to coral surface area. Greater accuracy in estimating ratios of associations involving multiple clades is achieved compared with previous real-time PCR assays based on high-copy ribosomal DNA loci (error within an order of magnitude). Healthy adult A. millepora containing ~1.4 × 10(6) zooxanthellae per cm(2) (as determined by haemocytometer counts) had S/H ratios of c. 0.15, i.e. ~15 symbiont cells per 100 host cells. In severely bleached colonies, this ratio decreased to less than 0.005. Because of its capacity to accurately determine both densities and ratios of multiple symbionts within one sample, the assay will open the door for novel research into the mechanisms of symbiont shuffling and switching.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 225 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
United States 5 2%
New Zealand 3 1%
Germany 3 1%
Australia 3 1%
Taiwan 2 <1%
Saudi Arabia 1 <1%
Portugal 1 <1%
Malaysia 1 <1%
Mexico 1 <1%
Other 4 2%
Unknown 201 89%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 64 28%
Researcher 45 20%
Student > Bachelor 28 12%
Student > Master 26 12%
Student > Doctoral Student 7 3%
Other 21 9%
Unknown 34 15%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 122 54%
Environmental Science 29 13%
Biochemistry, Genetics and Molecular Biology 15 7%
Earth and Planetary Sciences 6 3%
Business, Management and Accounting 3 1%
Other 7 3%
Unknown 43 19%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 5. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 01 February 2013.
All research outputs
#7,605,073
of 28,841,988 outputs
Outputs from Molecular Ecology Resources
#870
of 1,953 outputs
Outputs of similar age
#48,574
of 205,682 outputs
Outputs of similar age from Molecular Ecology Resources
#6
of 27 outputs
Altmetric has tracked 28,841,988 research outputs across all sources so far. This one has received more attention than most of these and is in the 72nd percentile.
So far Altmetric has tracked 1,953 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 10.1. This one has gotten more attention than average, scoring higher than 53% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 205,682 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 74% of its contemporaries.
We're also able to compare this research output to 27 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 62% of its contemporaries.