| Title |
Promiscuous antibodies characterised by their physico-chemical properties: From sequence to structure and back
|
|---|---|
| Published in |
Progress in Biophysics & Molecular Biology, September 2016
|
| DOI | 10.1016/j.pbiomolbio.2016.09.002 |
| Pubmed ID | |
| Authors | |
| Abstract |
Human B cells produce antibodies, which bind to their cognate antigen based on distinct molecular properties of the antibody CDR loop. We have analysed a set of 10 antibodies showing a clear difference in their binding properties to a panel of antigens, resulting in two subsets of antibodies with a distinct binding phenotype. We call the observed binding multiplicity 'promiscuous' and selected physico-chemical CDRH3 characteristics and conformational preferences may characterise these promiscuous antibodies. To classify CDRH3 physico-chemical properties playing a role in their binding properties, we used statistical analyses of the sequences annotated by Kidera factors. To characterise structure-function requirements for antigen binding multiplicity we employed Molecular Modelling and Monte Carlo based coarse-grained simulations. The ability to predict the molecular causes of promiscuous, multi-binding behaviour would greatly improve the efficiency of the therapeutic antibody discovery process. |
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Demographic breakdown
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Mendeley demographics
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Demographic breakdown
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|---|---|---|
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| Student > Master | 13 | 18% |
| Student > Ph. D. Student | 10 | 14% |
| Student > Bachelor | 8 | 11% |
| Student > Doctoral Student | 6 | 8% |
| Other | 8 | 11% |
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| Chemical Engineering | 2 | 3% |
| Other | 8 | 11% |
| Unknown | 10 | 14% |