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A Chemical Proteomics Approach to Profiling the ATP-binding Proteome of Mycobacterium tuberculosis *

Overview of attention for article published in Molecular and Cellular Proteomics, March 2013
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Article details
Title
A Chemical Proteomics Approach to Profiling the ATP-binding Proteome of Mycobacterium tuberculosis *
Published in
Molecular and Cellular Proteomics, March 2013
DOI 10.1074/mcp.m112.025635
Pubmed ID
Authors
Abstract

Tuberculosis, caused by Mycobacterium tuberculosis, remains one of the leading causes of death worldwide despite extensive research, directly observed therapy using multidrug regimens, and the widespread use of a vaccine. The majority of patients harbor the bacterium in a state of metabolic dormancy. New drugs with novel modes of action are needed to target essential metabolic pathways in M. tuberculosis; ATP-competitive enzyme inhibitors are one such class. Previous screening efforts for ATP-competitive enzyme inhibitors identified several classes of lead compounds that demonstrated potent anti-mycobacterial efficacy as well as tolerable levels of toxicity in cell culture. In this report, a probe-based chemoproteomic approach was used to selectively profile the M. tuberculosis ATP-binding proteome in normally growing and hypoxic M. tuberculosis. From these studies, 122 ATP-binding proteins were identified in either metabolic state, and roughly 60% of these are reported to be essential for survival in vitro. These data are available through ProteomeXchange with identifier PXD000141. Protein families vital to the survival of the tubercle bacillus during hypoxia emerged from our studies. Specifically, along with members of the DosR regulon, several proteins involved in energy metabolism (Icl/Rv0468 and Mdh/Rv1240) and lipid biosynthesis (UmaA/Rv0469, DesA1/Rv0824c, and DesA2/Rv1094) were found to be differentially abundant in hypoxic versus normal growing cultures. These pathways represent a subset of proteins that may be relevant therapeutic targets for development of novel ATP-competitive antibiotics.

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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 92 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
South Africa 1 1%
United States 1 1%
Netherlands 1 1%
Unknown 89 97%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 18 20%
Student > Ph. D. Student 16 17%
Student > Master 16 17%
Student > Bachelor 7 8%
Professor 4 4%
Other 14 15%
Unknown 17 18%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 34 37%
Biochemistry, Genetics and Molecular Biology 9 10%
Medicine and Dentistry 9 10%
Chemistry 9 10%
Immunology and Microbiology 6 7%
Other 9 10%
Unknown 16 17%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 08 April 2013.
All research outputs
#24,786,738
of 34,410,315 outputs
Outputs from Molecular and Cellular Proteomics
#3,209
of 3,804 outputs
Outputs of similar age
#174,523
of 242,105 outputs
Outputs of similar age from Molecular and Cellular Proteomics
#48
of 62 outputs
Altmetric has tracked 34,410,315 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 3,804 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 8.2. This one is in the 11th percentile – i.e., 11% of its peers scored the same or lower than it.
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We're also able to compare this research output to 62 others from the same source and published within six weeks on either side of this one. This one is in the 19th percentile – i.e., 19% of its contemporaries scored the same or lower than it.