↓ Skip to main content

tmVar: a text mining approach for extracting sequence variants in biomedical literature

Overview of attention for article published in Bioinformatics, April 2013
Altmetric Badge

About this Attention Score

  • In the top 5% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (95th percentile)
  • High Attention Score compared to outputs of the same age and source (94th percentile)

Mentioned by

news
3 news outlets
twitter
12 X users
patent
6 patents

Readers on

mendeley
146 Mendeley
citeulike
6 CiteULike
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Article details
Title
tmVar: a text mining approach for extracting sequence variants in biomedical literature
Published in
Bioinformatics, April 2013
DOI 10.1093/bioinformatics/btt156
Pubmed ID
Authors
Abstract

Text-mining mutation information from the literature becomes a critical part of the bioinformatics approach for the analysis and interpretation of sequence variations in complex diseases in the post-genomic era. It has also been used for assisting the creation of disease-related mutation databases. Most of existing approaches are rule-based and focus on limited types of sequence variations, such as protein point mutations. Thus, extending their extraction scope requires significant manual efforts in examining new instances and developing corresponding rules. As such, new automatic approaches are greatly needed for extracting different kinds of mutations with high accuracy.

Login to access the Attention Digest and the Sentiment Analysis related to this output.

Timeline Attention over time Attention Score history
Login to access the full charts related to this output.
Activity
Login to access the full charts related to this output.
X Demographics

X Demographics

The data shown below were collected from the profiles of 12 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 146 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Login to view Mendeley reader trends over time.

Geographical breakdown

Geographical breakdown
Country Count As %
United States 3 2%
United Kingdom 2 1%
Spain 2 1%
Sweden 1 <1%
Portugal 1 <1%
Luxembourg 1 <1%
Japan 1 <1%
Croatia 1 <1%
France 1 <1%
Other 3 2%
Unknown 130 89%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 38 26%
Student > Master 23 16%
Student > Ph. D. Student 22 15%
Student > Bachelor 8 5%
Other 6 4%
Other 24 16%
Unknown 25 17%
Readers by discipline
Readers by discipline Count As %
Computer Science 49 34%
Agricultural and Biological Sciences 35 24%
Biochemistry, Genetics and Molecular Biology 10 7%
Medicine and Dentistry 8 5%
Engineering 4 3%
Other 14 10%
Unknown 26 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 30. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 08 August 2023.
All research outputs
#1,624,128
of 33,079,649 outputs
Outputs from Bioinformatics
#536
of 14,225 outputs
Outputs of similar age
#10,766
of 240,436 outputs
Outputs of similar age from Bioinformatics
#9
of 154 outputs
Altmetric has tracked 33,079,649 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 95th percentile: it's in the top 5% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 14,225 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 8.1. This one has done particularly well, scoring higher than 96% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 240,436 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 95% of its contemporaries.
We're also able to compare this research output to 154 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 94% of its contemporaries.