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An OmpW-dependent T4-like phage infects Serratia sp. ATCC 39006

Overview of attention for article published in Microbial Genomics, March 2023
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  • Good Attention Score compared to outputs of the same age (67th percentile)
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Article details
Title
An OmpW-dependent T4-like phage infects Serratia sp. ATCC 39006
Published in
Microbial Genomics, March 2023
DOI 10.1099/mgen.0.000968
Pubmed ID
Authors
Abstract

Serratia sp. ATCC 39006 is a Gram-negative bacterium that has been used to study the function of phage defences, such as CRISPR-Cas, and phage counter-defence mechanisms. To expand our phage collection to study the phage-host interaction with Serratia sp. ATCC 39006, we isolated the T4-like myovirus LC53 in Ōtepoti Dunedin, Aotearoa New Zealand. Morphological, phenotypic and genomic characterization revealed that LC53 is virulent and similar to other Serratia, Erwinia and Kosakonia phages belonging to the genus Winklervirus. Using a transposon mutant library, we identified the host ompW gene as essential for phage infection, suggesting that it encodes the phage receptor. The genome of LC53 encodes all the characteristic T4-like core proteins involved in phage DNA replication and generation of viral particles. Furthermore, our bioinformatic analysis suggests that the transcriptional organization of LC53 is similar to that of Escherichia coli phage T4. Importantly, LC53 encodes 18 tRNAs, which likely compensate for differences in GC content between phage and host genomes. Overall, this study describes a newly isolated phage infecting Serratia sp. ATCC 39006 that expands the diversity of phages available to study phage-host interactions.

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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 10 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 10 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Unspecified 1 10%
Student > Ph. D. Student 1 10%
Researcher 1 10%
Student > Postgraduate 1 10%
Other 1 10%
Other 0 0%
Unknown 5 50%
Readers by discipline
Readers by discipline Count As %
Unspecified 1 10%
Biochemistry, Genetics and Molecular Biology 1 10%
Agricultural and Biological Sciences 1 10%
Immunology and Microbiology 1 10%
Chemistry 1 10%
Other 0 0%
Unknown 5 50%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 April 2023.
All research outputs
#7,546,874
of 24,593,959 outputs
Outputs from Microbial Genomics
#674
of 986 outputs
Outputs of similar age
#129,089
of 406,048 outputs
Outputs of similar age from Microbial Genomics
#38
of 67 outputs
Altmetric has tracked 24,593,959 research outputs across all sources so far. This one has received more attention than most of these and is in the 69th percentile.
So far Altmetric has tracked 986 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 13.8. This one is in the 31st percentile – i.e., 31% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 406,048 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 67% of its contemporaries.
We're also able to compare this research output to 67 others from the same source and published within six weeks on either side of this one. This one is in the 41st percentile – i.e., 41% of its contemporaries scored the same or lower than it.