| Title |
A genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease
|
|---|---|
| Published in |
Nature Genetics, March 2011
|
| DOI | 10.1038/ng.782 |
| Pubmed ID | |
| Authors |
John F Peden, Jemma C Hopewell, Danish Saleheen, John C Chambers, Jorg Hager, Nicole Soranzo, Rory Collins, John Danesh, Paul Elliott, Martin Farrall, Kathy Stirrups, Weihua Zhang, Anders Hamsten, Sarah Parish, Mark Lathrop, Hugh Watkins, Robert Clarke, Panos Deloukas, Jaspal S Kooner, Anuj Goel, Halit Ongen, Rona J Strawbridge, Simon Heath, Anders Mälarstig, Anna Helgadottir, John Öhrvik, Muhammed Murtaza, Simon Potter, Sarah E Hunt, Marc Delepine, Shapour Jalilzadeh, Tomas Axelsson, Ann-Christine Syvanen, Rhian Gwilliam, Suzannah Bumpstead, Emma Gray, Sarah Edkins, Lasse Folkersen, Theodosios Kyriakou, Anders Franco-Cereceda, Anders Gabrielsen, Udo Seedorf, Per Eriksson, Alison Offer, Louise Bowman, Peter Sleight, Jane Armitage, Richard Peto, Goncalo Abecasis, Nabeel Ahmed, Mark Caulfield, Peter Donnelly, Philippe Froguel, Angad S Kooner, Mark I McCarthy, Nilesh J Samani, James Scott, Joban Sehmi, Angela Silveira, Mai-Lis Hellénius, Ferdinand M van 't Hooft, Gunnar Olsson, Stephan Rust, Gerd Assmann, Simona Barlera, Gianni Tognoni, Maria Grazia Franzosi, Pamela Linksted, Fiona R Green, Asif Rasheed, Moazzam Zaidi, Nabi Shah, Maria Samuel, Nadeem H Mallick, Muhammad Azhar, Khan S Zaman, Abdus Samad, Mohammad Ishaq, Ali R Gardezi, Fazal-ur-Rehman Memon, Philippe M Frossard, Tim Spector, Leena Peltonen, Markku S Nieminen, Juha Sinisalo, Veikko Salomaa, Samuli Ripatti, Derrick Bennett, Karin Leander, Bruna Gigante, Ulf de Faire, Silvia Pietri, Francesca Gori, Roberto Marchioli, Suthesh Sivapalaratnam, John J P Kastelein, Mieke D Trip, Eirini V Theodoraki, George V Dedoussis, Jamie C Engert, Salim Yusuf, Sonia S Anand |
| Abstract |
Genome-wide association studies have identified 11 common variants convincingly associated with coronary artery disease (CAD)¹⁻⁷, a modest number considering the apparent heritability of CAD⁸. All of these variants have been discovered in European populations. We report a meta-analysis of four large genome-wide association studies of CAD, with ∼575,000 genotyped SNPs in a discovery dataset comprising 15,420 individuals with CAD (cases) (8,424 Europeans and 6,996 South Asians) and 15,062 controls. There was little evidence for ancestry-specific associations, supporting the use of combined analyses. Replication in an independent sample of 21,408 cases and 19,185 controls identified five loci newly associated with CAD (P < 5 × 10⁻⁸ in the combined discovery and replication analysis): LIPA on 10q23, PDGFD on 11q22, ADAMTS7-MORF4L1 on 15q25, a gene rich locus on 7q22 and KIAA1462 on 10p11. The CAD-associated SNP in the PDGFD locus showed tissue-specific cis expression quantitative trait locus effects. These findings implicate new pathways for CAD susceptibility. |
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Mendeley demographics
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| United States | 4 | <1% |
| Sweden | 3 | <1% |
| United Kingdom | 3 | <1% |
| Netherlands | 1 | <1% |
| Mexico | 1 | <1% |
| Italy | 1 | <1% |
| France | 1 | <1% |
| Finland | 1 | <1% |
| Unknown | 405 | 96% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Researcher | 93 | 22% |
| Student > Ph. D. Student | 72 | 17% |
| Student > Master | 48 | 11% |
| Student > Bachelor | 28 | 7% |
| Professor > Associate Professor | 28 | 7% |
| Other | 77 | 18% |
| Unknown | 74 | 18% |
| Readers by discipline | Count | As % |
|---|---|---|
| Medicine and Dentistry | 111 | 26% |
| Agricultural and Biological Sciences | 111 | 26% |
| Biochemistry, Genetics and Molecular Biology | 59 | 14% |
| Computer Science | 9 | 2% |
| Pharmacology, Toxicology and Pharmaceutical Science | 6 | 1% |
| Other | 33 | 8% |
| Unknown | 91 | 22% |