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Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea

Overview of attention for article published in Scientific Reports, January 2017
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About this Attention Score

  • In the top 5% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (97th percentile)
  • High Attention Score compared to outputs of the same age and source (96th percentile)

Mentioned by

news
8 news outlets
blogs
2 blogs
policy
2 policy sources
twitter
44 X users
googleplus
1 Google+ user

Citations

dimensions_citation
357 Dimensions

Readers on

mendeley
691 Mendeley
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Title
Environmental DNA metabarcoding reveals local fish communities in a species-rich coastal sea
Published in
Scientific Reports, January 2017
DOI 10.1038/srep40368
Pubmed ID
Authors

Satoshi Yamamoto, Reiji Masuda, Yukuto Sato, Tetsuya Sado, Hitoshi Araki, Michio Kondoh, Toshifumi Minamoto, Masaki Miya

Abstract

Environmental DNA (eDNA) metabarcoding has emerged as a potentially powerful tool to assess aquatic community structures. However, the method has hitherto lacked field tests that evaluate its effectiveness and practical properties as a biodiversity monitoring tool. Here, we evaluated the ability of eDNA metabarcoding to reveal fish community structures in species-rich coastal waters. High-performance fish-universal primers and systematic spatial water sampling at 47 stations covering ~11 km(2) revealed the fish community structure at a species resolution. The eDNA metabarcoding based on a 6-h collection of water samples detected 128 fish species, of which 62.5% (40 species) were also observed by underwater visual censuses conducted over a 14-year period. This method also detected other local fishes (≥23 species) that were not observed by the visual censuses. These eDNA metabarcoding features will enhance marine ecosystem-related research, and the method will potentially become a standard tool for surveying fish communities.

X Demographics

X Demographics

The data shown below were collected from the profiles of 44 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 691 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 2 <1%
Chile 1 <1%
Australia 1 <1%
Italy 1 <1%
Sweden 1 <1%
United States 1 <1%
Unknown 684 99%

Demographic breakdown

Readers by professional status Count As %
Researcher 132 19%
Student > Ph. D. Student 119 17%
Student > Master 112 16%
Student > Bachelor 66 10%
Other 30 4%
Other 86 12%
Unknown 146 21%
Readers by discipline Count As %
Agricultural and Biological Sciences 239 35%
Environmental Science 139 20%
Biochemistry, Genetics and Molecular Biology 96 14%
Earth and Planetary Sciences 12 2%
Engineering 6 <1%
Other 35 5%
Unknown 164 24%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 106. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 May 2023.
All research outputs
#406,059
of 25,728,350 outputs
Outputs from Scientific Reports
#4,484
of 142,656 outputs
Outputs of similar age
#8,598
of 425,776 outputs
Outputs of similar age from Scientific Reports
#129
of 3,867 outputs
Altmetric has tracked 25,728,350 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 98th percentile: it's in the top 5% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 142,656 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 18.8. This one has done particularly well, scoring higher than 96% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 425,776 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 97% of its contemporaries.
We're also able to compare this research output to 3,867 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 96% of its contemporaries.