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Effect of ionic strength on the assembly of simian vacuolating virus capsid protein around poly(styrene sulfonate)

Overview of attention for article published in The European Physical Journal E, November 2023
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Article details
Title
Effect of ionic strength on the assembly of simian vacuolating virus capsid protein around poly(styrene sulfonate)
Published in
The European Physical Journal E, November 2023
DOI 10.1140/epje/s10189-023-00363-x
Pubmed ID
Authors
Abstract

Virus-like particles (VLPs) are noninfectious nanocapsules that can be used for drug delivery or vaccine applications. VLPs can be assembled from virus capsid proteins around a condensing agent, such as RNA, DNA, or a charged polymer. Electrostatic interactions play an important role in the assembly reaction. VLPs assemble from many copies of capsid protein, with a combinatorial number of intermediates. Hence, the mechanism of the reaction is poorly understood. In this paper, we combined solution small-angle X-ray scattering (SAXS), cryo-transmission electron microscopy (TEM), and computational modeling to determine the effect of ionic strength on the assembly of Simian Vacuolating Virus 40 (SV40)-like particles. We mixed poly(styrene sulfonate) with SV40 capsid protein pentamers at different ionic strengths. We then characterized the assembly product by SAXS and cryo-TEM. To analyze the data, we performed Langevin dynamics simulations using a coarse-grained model that revealed incomplete, asymmetric VLP structures consistent with the experimental data. We found that close to physiological ionic strength, [Formula: see text] VLPs coexisted with VP1 pentamers. At lower or higher ionic strengths, incomplete particles coexisted with pentamers and [Formula: see text] particles. Including the simulated structures was essential to explain the SAXS data in a manner that is consistent with the cryo-TEM images.

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X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 9 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 9 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Lecturer 1 11%
Student > Bachelor 1 11%
Student > Master 1 11%
Researcher 1 11%
Professor > Associate Professor 1 11%
Other 1 11%
Unknown 3 33%
Readers by discipline
Readers by discipline Count As %
Chemical Engineering 1 11%
Biochemistry, Genetics and Molecular Biology 1 11%
Physics and Astronomy 1 11%
Neuroscience 1 11%
Chemistry 1 11%
Other 0 0%
Unknown 4 44%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 02 November 2023.
All research outputs
#17,203,112
of 25,271,884 outputs
Outputs from The European Physical Journal E
#421
of 697 outputs
Outputs of similar age
#189,654
of 349,517 outputs
Outputs of similar age from The European Physical Journal E
#10
of 16 outputs
Altmetric has tracked 25,271,884 research outputs across all sources so far. This one is in the 21st percentile – i.e., 21% of other outputs scored the same or lower than it.
So far Altmetric has tracked 697 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 7.9. This one is in the 30th percentile – i.e., 30% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 349,517 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 33rd percentile – i.e., 33% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 16 others from the same source and published within six weeks on either side of this one. This one is in the 25th percentile – i.e., 25% of its contemporaries scored the same or lower than it.