| Title |
Human SNP Links Differential Outcomes in Inflammatory and Infectious Disease to a FOXO3-Regulated Pathway
|
|---|---|
| Published in |
Cell, September 2013
|
| DOI | 10.1016/j.cell.2013.08.034 |
| Pubmed ID | |
| Authors |
James C. Lee, Marion Espéli, Carl A. Anderson, Michelle A. Linterman, Joanna M. Pocock, Naomi J. Williams, Rebecca Roberts, Sebastien Viatte, Bo Fu, Norbert Peshu, Tran Tinh Hien, Nguyen Hoan Phu, Emma Wesley, Cathryn Edwards, Tariq Ahmad, John C. Mansfield, Richard Gearry, Sarah Dunstan, Thomas N. Williams, Anne Barton, Carola G. Vinuesa, IBD Genetics Consortium, Anne Phillips, Craig Mowat, Hazel Drummond, Nick Kennedy, Charlie W. Lees, Jack Satsangi, Kirstin Taylor, Natalie J. Prescott, Christopher G. Mathew, Peter Simpson, Alison Simmons, Mohammed Khan, William G. Newman, Christopher Hawkey, Ailsa Hart, David C. Wilson, Paul Henderson, Jeffrey C. Barrett, Miles Parkes, Paul A. Lyons, Kenneth G.C. Smith |
| Abstract |
The clinical course and eventual outcome, or prognosis, of complex diseases varies enormously between affected individuals. This variability critically determines the impact a disease has on a patient's life but is very poorly understood. Here, we exploit existing genome-wide association study data to gain insight into the role of genetics in prognosis. We identify a noncoding polymorphism in FOXO3A (rs12212067: T > G) at which the minor (G) allele, despite not being associated with disease susceptibility, is associated with a milder course of Crohn's disease and rheumatoid arthritis and with increased risk of severe malaria. Minor allele carriage is shown to limit inflammatory responses in monocytes via a FOXO3-driven pathway, which through TGFβ1 reduces production of proinflammatory cytokines, including TNFα, and increases production of anti-inflammatory cytokines, including IL-10. Thus, we uncover a shared genetic contribution to prognosis in distinct diseases that operates via a FOXO3-driven pathway modulating inflammatory responses. |
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X Demographics
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Spain | 9 | 16% |
| United States | 5 | 9% |
| United Kingdom | 3 | 5% |
| El Salvador | 2 | 4% |
| Venezuela, Bolivarian Republic of | 2 | 4% |
| Italy | 1 | 2% |
| Argentina | 1 | 2% |
| Colombia | 1 | 2% |
| Luxembourg | 1 | 2% |
| Other | 6 | 11% |
| Unknown | 26 | 46% |
Demographic breakdown
| Type | Count | As % |
|---|---|---|
| Members of the public | 48 | 84% |
| Scientists | 7 | 12% |
| Science communicators (journalists, bloggers, editors) | 2 | 4% |
Mendeley demographics
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| United States | 11 | 3% |
| United Kingdom | 8 | 2% |
| Germany | 4 | <1% |
| Netherlands | 3 | <1% |
| Spain | 2 | <1% |
| Saudi Arabia | 1 | <1% |
| Luxembourg | 1 | <1% |
| Iran, Islamic Republic of | 1 | <1% |
| France | 1 | <1% |
| Other | 1 | <1% |
| Unknown | 387 | 92% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Researcher | 106 | 25% |
| Student > Ph. D. Student | 91 | 22% |
| Student > Bachelor | 35 | 8% |
| Student > Master | 26 | 6% |
| Professor | 24 | 6% |
| Other | 91 | 22% |
| Unknown | 47 | 11% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 144 | 34% |
| Biochemistry, Genetics and Molecular Biology | 75 | 18% |
| Medicine and Dentistry | 72 | 17% |
| Immunology and Microbiology | 30 | 7% |
| Computer Science | 7 | 2% |
| Other | 35 | 8% |
| Unknown | 57 | 14% |