Enhancing nucleotide sequence representations in genomic analysis with contrastive optimization

Overview of attention for article published in Communications Biology, March 2025

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So happy to collaborate with @bahrad.bsky.social and other authors on this publication! Using contrastive learning to learn both taxonomic and gene features to classify sequences! https://bsky.app/profile/did:plc:5u6dp4ed5xyuf6nbihfzq3wj/post/3llohuld…

Scorpio enhances genomic language models with contrastive learning and hierarchical sampling to improve classification, generalization, and biological representation, enabling transferable embeddings to other domains. @gail-datadrivenbio.bsky.social w…

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