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Probabilistic Identification of Cerebellar Cortical Neurones across Species

Overview of attention for article published in PLOS ONE, March 2013
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Article details
Title
Probabilistic Identification of Cerebellar Cortical Neurones across Species
Published in
PLOS ONE, March 2013
DOI 10.1371/journal.pone.0057669
Pubmed ID
Authors
Abstract

Despite our fine-grain anatomical knowledge of the cerebellar cortex, electrophysiological studies of circuit information processing over the last fifty years have been hampered by the difficulty of reliably assigning signals to identified cell types. We approached this problem by assessing the spontaneous activity signatures of identified cerebellar cortical neurones. A range of statistics describing firing frequency and irregularity were then used, individually and in combination, to build Gaussian Process Classifiers (GPC) leading to a probabilistic classification of each neurone type and the computation of equi-probable decision boundaries between cell classes. Firing frequency statistics were useful for separating Purkinje cells from granular layer units, whilst firing irregularity measures proved most useful for distinguishing cells within granular layer cell classes. Considered as single statistics, we achieved classification accuracies of 72.5% and 92.7% for granular layer and molecular layer units respectively. Combining statistics to form twin-variate GPC models substantially improved classification accuracies with the combination of mean spike frequency and log-interval entropy offering classification accuracies of 92.7% and 99.2% for our molecular and granular layer models, respectively. A cross-species comparison was performed, using data drawn from anaesthetised mice and decerebrate cats, where our models offered 80% and 100% classification accuracy. We then used our models to assess non-identified data from awake monkeys and rabbits in order to highlight subsets of neurones with the greatest degree of similarity to identified cell classes. In this way, our GPC-based approach for tentatively identifying neurones from their spontaneous activity signatures, in the absence of an established ground-truth, nonetheless affords the experimenter a statistically robust means of grouping cells with properties matching known cell classes. Our approach therefore may have broad application to a variety of future cerebellar cortical investigations, particularly in awake animals where opportunities for definitive cell identification are limited.

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Mendeley demographics

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The data shown below were compiled from readership statistics for 88 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
United States 1 1%
United Kingdom 1 1%
France 1 1%
Germany 1 1%
China 1 1%
Unknown 83 94%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 23 26%
Researcher 19 22%
Student > Master 10 11%
Student > Doctoral Student 6 7%
Professor > Associate Professor 5 6%
Other 12 14%
Unknown 13 15%
Readers by discipline
Readers by discipline Count As %
Neuroscience 30 34%
Agricultural and Biological Sciences 25 28%
Engineering 5 6%
Computer Science 2 2%
Psychology 2 2%
Other 8 9%
Unknown 16 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 09 October 2013.
All research outputs
#31,183,241
of 34,361,833 outputs
Outputs from PLOS ONE
#202,016
of 224,520 outputs
Outputs of similar age
#217,740
of 241,829 outputs
Outputs of similar age from PLOS ONE
#4,888
of 5,729 outputs
Altmetric has tracked 34,361,833 research outputs across all sources so far. This one is in the 1st percentile – i.e., 1% of other outputs scored the same or lower than it.
So far Altmetric has tracked 224,520 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 17.2. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 5,729 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.