| Title |
Assessing the bacterial contribution to the plastid proteome
|
|---|---|
| Published in |
Trends in Plant Science, October 2013
|
| DOI | 10.1016/j.tplants.2013.09.007 |
| Pubmed ID | |
| Authors | |
| Abstract |
Plastids fulfill a variety of different functions (e.g., photosynthesis and amino acid biosynthesis) that rely on proteins of cyanobacterial (i.e., endosymbiont), noncyanobacterial, and 'host' (eukaryotic) origins. Analysis of plastid proteome data from glaucophytes and green algae allows robust inference of protein origins and organelle protein sharing across the >1 billion years of Archaeplastida evolution. Here, we show that more than one-third of genes encoding plastid proteins lack detectable homologs in Cyanobacteria, underlining the taxonomically broad contributions to plastid functions. Chlamydiae and Proteobacteria are the most significant other bacterial sources of plastid proteins. Mapping of plastid proteins to metabolic pathways shows a core set of anciently derived proteins in Archaeplastida, with many others being lineage specific and derived from independent horizontal gene transfer (HGT) events. |
Login to access the Attention Digest and the Sentiment Analysis related to this output.
X Demographics
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| Egypt | 1 | 50% |
| Unknown | 1 | 50% |
Demographic breakdown
| Type | Count | As % |
|---|---|---|
| Scientists | 1 | 50% |
| Science communicators (journalists, bloggers, editors) | 1 | 50% |
Mendeley demographics
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| United States | 2 | 2% |
| Canada | 2 | 2% |
| South Africa | 1 | 1% |
| New Zealand | 1 | 1% |
| Greece | 1 | 1% |
| United Kingdom | 1 | 1% |
| France | 1 | 1% |
| Germany | 1 | 1% |
| Czechia | 1 | 1% |
| Other | 0 | 0% |
| Unknown | 78 | 88% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Researcher | 17 | 19% |
| Student > Ph. D. Student | 12 | 13% |
| Professor | 10 | 11% |
| Student > Master | 10 | 11% |
| Student > Bachelor | 6 | 7% |
| Other | 13 | 15% |
| Unknown | 21 | 24% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 36 | 40% |
| Biochemistry, Genetics and Molecular Biology | 14 | 16% |
| Environmental Science | 5 | 6% |
| Immunology and Microbiology | 2 | 2% |
| Arts and Humanities | 1 | 1% |
| Other | 5 | 6% |
| Unknown | 26 | 29% |